Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004648 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:142373431-142376685 (+) |
| Description | Similar to CYP71: Peptidyl-prolyl cis-trans isomerase CYP71 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004648 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 24 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g44600 |
PPIases accelerate the folding of proteins (Probable). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000398 | mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.355; coverage=97.76; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.707; coverage=97.12; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.707; coverage=97.12; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009909 | regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009933 | meristem structural organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010082 | regulation of root meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010305 | leaf vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010338 | leaf formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010358 | leaf shaping | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031507 | heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045814 | negative regulation of gene expression, epigenetic | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048440 | carpel development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048443 | stamen development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048453 | sepal formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.355; coverage=97.76; evalue=0.0; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005681 | spliceosomal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.707; coverage=97.12; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.707; coverage=97.12; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071006 | U2-type catalytic step 1 spliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.707; coverage=97.12; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071013 | catalytic step 2 spliceosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.707; coverage=97.12; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042393 | histone binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G44600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.833; coverage=96.0; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:517560 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=53.542; coverage=97.12; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:23398 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.355; coverage=97.76; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:238831 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.707; coverage=97.12; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100174766 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.355; coverage=97.76; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |