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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_003607
Query referenceOH1004
LocationChr01:88598728-88601638 (+)
DescriptionSimilar to BPA1: Binding partner of ACD11 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_003607 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g16840 Binding partner of ACD11 1. No verified direct reference in this release
At2g01770 Vacuolar iron transporter involved in the transfer of iron ions from the cytosol to the vacuole for intracellular iron storage.
Localization of iron in Arabidopsis seed requires the vacuolar membrane transporter VIT1.2006 · DOI: 10.1126/science.1132563
Identification of the endodermal vacuole as the iron storage compartment in the Arabidopsis embryo.2009 · DOI: 10.1104/pp.109.144444
Bypassing Iron Storage in Endodermal Vacuoles Rescues the Iron Mobilization Defect in the natural resistance associated-macrophage protein3natural resistance associated-macrophage protein4 Double Mutant.2015 · DOI: 10.1104/pp.15.00380

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0463400 Vacuolar iron transporter involved in the transfer of iron ions from the cytosol to the vacuole for intracellular iron storage.
Vacuolar membrane transporters OsVIT1 and OsVIT2 modulate iron translocation between flag leaves and seeds in rice.2012 · DOI: 10.1111/j.1365-313x.2012.05088.x

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006826iron ion transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.5; coverage=16.736; evalue=1.89e-12; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006879intracellular iron ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.667; coverage=16.318; evalue=1.57e-12; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030026intracellular manganese ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.667; coverage=16.318; evalue=1.57e-12; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034051negative regulation of plant-type hypersensitive responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.516; coverage=76.151; evalue=2.32e-20; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050832defense response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.516; coverage=76.151; evalue=2.32e-20; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.516; coverage=76.151; evalue=2.32e-20; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005774vacuolar membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.667; coverage=16.318; evalue=1.57e-12; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.516; coverage=76.151; evalue=2.32e-20; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.516; coverage=76.151; evalue=2.32e-20; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010494cytoplasmic stress granuleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.516; coverage=76.151; evalue=2.32e-20; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.516; coverage=76.151; evalue=2.32e-20; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005381iron ion transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.667; coverage=16.318; evalue=1.57e-12; UniProt GO evidence=IMP:CACAOUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005384manganese ion transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.667; coverage=16.318; evalue=1.57e-12; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042803protein homodimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.5; coverage=16.736; evalue=1.89e-12; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.667; coverage=16.318; evalue=1.57e-12; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G16840KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=33.516; coverage=76.151; evalue=2.32e-20UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0463400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.667; coverage=16.318; evalue=1.57e-12UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGegr:104453645KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.5; coverage=16.736; evalue=1.89e-12UniProtKB/Swiss-Prot DAT 2026 current_release