Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_003136`
Query reference	OH1004
Location	Chr01:68875332-68876632 (-)
Description	Similar to H6H: Hyoscyamine 6-dioxygenase (Hyoscyamus niger OX%3D4079)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_003136 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 22 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g24530`	Converts salicylic acid (SA) to 2,3-dihydroxybenzoic acid (2,3-DHBA) (By similarity).	Identification of arabidopsis loci required for susceptibility to the downy mildew pathogen Hyaloperonospora parasitica.2005 · DOI: 10.1094/mpmi-18-0583 Arabidopsis DMR6 encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.2008 · DOI: 10.1111/j.1365-313x.2008.03427.x DOWNY MILDEW RESISTANT 6 and DMR6-LIKE OXYGENASE 1 are partially redundant but distinct suppressors of immunity in Arabidopsis.2015 · DOI: 10.1111/tpj.12719
`At4g10490`	Converts salicylic acid (SA) to 2,3-dihydroxybenzoic acid (2,3-DHBA) (By similarity).	DOWNY MILDEW RESISTANT 6 and DMR6-LIKE OXYGENASE 1 are partially redundant but distinct suppressors of immunity in Arabidopsis.2015 · DOI: 10.1111/tpj.12719

Rice

Reference gene ID	Possible function	Papers / DOI
`Os10g0536400`	Catalyzes the 3-beta-hydroxylation of 2S-flavanones to 2R,3R- dihydroflavonols which are intermediates in the biosynthesis of flavonols, anthocyanidins, catechins and proanthocyanidins in plants.	Flavanone 3beta-hydroxylases from rice: key enzymes for favonol and anthocyanin biosynthesis.2008 · DOI: 10.1016/s1016-8478(23)17587-x

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0002229	defense response to oomycetes	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.92; coverage=70.625; evalue=3.14e-62; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0002238	response to molecule of fungal origin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.559; coverage=77.188; evalue=7.07e-65; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0002239	response to oomycetes	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009617	response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009620	response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009751	response to salicylic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009805	coumarin biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.559; coverage=77.188; evalue=7.07e-65; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009813	flavonoid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.92; coverage=70.625; evalue=3.14e-62; UniProt GO evidence=IEA:UniProtKB-UniPathway	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010150	leaf senescence	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042742	defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046244	salicylic acid catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071456	cellular response to hypoxia	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=HEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.084; coverage=74.062; evalue=4.07e-52; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.92; coverage=70.625; evalue=3.14e-62; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031418	L-ascorbic acid binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.559; coverage=77.188; evalue=7.07e-65; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0033759	flavone synthase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0034785	salicylate 5-hydroxylase (NADH) activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045486	flavanone 3-dioxygenase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.92; coverage=70.625; evalue=3.14e-62; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.559; coverage=77.188; evalue=7.07e-65; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0047998	hyoscyamine (6S)-dioxygenase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.559; coverage=77.188; evalue=7.07e-65; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051213	dioxygenase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.084; coverage=74.062; evalue=4.07e-52; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ag:BAA05630	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.559; coverage=77.188; evalue=7.07e-65	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ag:BAA78340	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.748; coverage=76.875; evalue=2.61e-64	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G10490	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.084; coverage=74.062; evalue=4.07e-52	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G24530	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.805; coverage=70.625; evalue=1.08e-60	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os10g0536400	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.92; coverage=70.625; evalue=3.14e-62	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4349238	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.92; coverage=70.625; evalue=3.14e-62	UniProtKB/Swiss-Prot DAT 2026 current_release