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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_001694
Query referenceOH1004
LocationChr01:31470361-31482256 (-)
DescriptionSimilar to Ras-related protein Rab7 (Pisum sativum OX%3D3888)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_001694 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 16 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g18820 Essential for trafficking from prevacuolar compartments to vacuoles.
Mechanisms governing the endosomal membrane recruitment of the core retromer in Arabidopsis.2013 · DOI: 10.1074/jbc.m112.440503
Activation of the Rab7 GTPase by the MON1-CCZ1 Complex Is Essential for PVC-to-Vacuole Trafficking and Plant Growth in Arabidopsis.2014 · DOI: 10.1105/tpc.114.123141
At1g49300 Intracellular vesicle trafficking and protein transport.
Induction of salt and osmotic stress tolerance by overexpression of an intracellular vesicle trafficking protein AtRab7 (AtRabG3e).2004 · DOI: 10.1104/pp.103.025379

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006886intracellular protein transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.09; coverage=45.682; evalue=4.09e-112; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006979response to oxidative stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=80.597; coverage=45.682; evalue=1.36e-110; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007033vacuole organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.09; coverage=45.682; evalue=4.09e-112; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009651response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=80.597; coverage=45.682; evalue=1.36e-110; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015031protein transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.189; coverage=42.045; evalue=1.14e-115; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045324late endosome to vacuole transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.09; coverage=45.682; evalue=4.09e-112; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000325plant-type vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=80.597; coverage=45.682; evalue=1.36e-110; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.09; coverage=45.682; evalue=4.09e-112; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005774vacuolar membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.189; coverage=42.045; evalue=1.14e-115; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.09; coverage=45.682; evalue=4.09e-112; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.09; coverage=45.682; evalue=4.09e-112; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.189; coverage=42.045; evalue=1.14e-115; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009705plant-type vacuole membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.09; coverage=45.682; evalue=4.09e-112; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010008endosome membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.09; coverage=45.682; evalue=4.09e-112; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003924GTPase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.189; coverage=42.045; evalue=1.14e-115; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005525GTP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.189; coverage=42.045; evalue=1.14e-115; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G49300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=80.597; coverage=45.682; evalue=1.36e-110UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G18820KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.09; coverage=45.682; evalue=4.09e-112UniProtKB/Swiss-Prot DAT 2026 current_release