Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_001352 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:24567038-24572281 (+) |
| Description | Similar to RECQL4A: ATP-dependent DNA helicase Q-like 4A (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_001352 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 54 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g10930 |
DNA helicase involved in DNA repair. |
Arabidopsis RecQI4A suppresses homologous recombination and modulates DNA damage responses.2005 · DOI: 10.1111/j.1365-313x.2005.02501.x Two closely related RecQ helicases have antagonistic roles in homologous recombination and DNA repair in Arabidopsis thaliana.2007 · DOI: 10.1073/pnas.0705998104
|
At1g60930 |
3'-5' DNA helicase that may play a role in the repair of DNA (By similarity). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000070 | mitotic sister chromatid segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000706 | meiotic DNA double-strand break processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IGI:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000722 | telomere maintenance via recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000723 | telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IGI:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000725 | recombinational repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IGI:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000729 | DNA double-strand break processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000731 | DNA synthesis involved in DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000732 | DNA strand displacement | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006260 | DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006265 | DNA topological change | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006301 | DNA damage tolerance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006303 | double-strand break repair via nonhomologous end joining | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=IGI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010520 | regulation of reciprocal meiotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IGI:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010947 | negative regulation of meiotic joint molecule formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IGI:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031297 | replication fork processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IGI:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031573 | mitotic intra-S DNA damage checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031860 | telomeric 3' overhang formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IGI:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043007 | maintenance of rDNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044818 | mitotic G2/M transition checkpoint | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IGI:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045132 | meiotic chromosome segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051276 | chromosome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070417 | cellular response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070914 | UV-damage excision repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071140 | resolution of mitotic recombination intermediates | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071215 | cellular response to abscisic acid stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901291 | negative regulation of double-strand break repair via single-strand annealing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990426 | mitotic recombination-dependent replication fork processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990918 | double-strand break repair involved in meiotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000228 | nuclear chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031422 | RecQ family helicase-topoisomerase III complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043596 | nuclear replication fork | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000403 | Y-form DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003678 | DNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=ISS:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009378 | four-way junction helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043138 | 3'-5' DNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044547 | DNA topoisomerase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141; UniProt GO evidence=IMP:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990814 | DNA/DNA annealing activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G10930 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.201; coverage=102.065; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G60930 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.388; coverage=98.025; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG6920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.321; coverage=58.438; evalue=2.55e-142 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YMR190C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.805; coverage=49.282; evalue=1.05e-141 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2541620 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.101; coverage=67.504; evalue=9.45e-150 | UniProtKB/Swiss-Prot DAT 2026 current_release |