Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_001224 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:22276771-22279260 (+) |
| Description | Similar to KMS1: Vacuole membrane protein KMS1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_001224 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 26 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g14950 |
Involved in the early secretory pathway. | |
At1g05360 |
Involved in the early secretory pathway. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000045 | autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.037; coverage=76.673; evalue=2.96e-62; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006914 | autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=IDA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007030 | Golgi organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.037; coverage=76.673; evalue=2.96e-62; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010256 | endomembrane system organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.907; coverage=80.933; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.907; coverage=80.933; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016236 | macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.037; coverage=76.673; evalue=2.96e-62; UniProt GO evidence=IMP:WormBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016240 | autophagosome membrane docking | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034329 | cell junction assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042953 | lipoprotein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098609 | cell-cell adhesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140056 | organelle localization by membrane tethering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901896 | positive regulation of ATPase-coupled calcium transmembrane transporter activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902902 | negative regulation of autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.037; coverage=76.673; evalue=2.96e-62; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990456 | mitochondrion-endoplasmic reticulum membrane tethering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000407 | phagophore assembly site | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000421 | autophagosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.037; coverage=76.673; evalue=2.96e-62; UniProt GO evidence=IDA:WormBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005774 | vacuolar membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.321; coverage=82.15; evalue=1.02e-60; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.907; coverage=80.933; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.907; coverage=80.933; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.907; coverage=80.933; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.907; coverage=80.933; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.907; coverage=80.933; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033116 | endoplasmic reticulum-Golgi intermediate compartment membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017128 | phospholipid scramblase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G05360 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.158; coverage=80.933; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G14950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.907; coverage=80.933; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_Y37D8A.22 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=37.037; coverage=76.673; evalue=2.96e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:192129 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.39; coverage=83.164; evalue=2.28e-61 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:432249 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.321; coverage=82.15; evalue=1.02e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release |