Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_000626`
Query reference	OH1004
Location	Chr01:11341250-11343521 (-)
Description	Similar to CAX4: Vacuolar cation/proton exchanger 4 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000626 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 26 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g01490`	Vacuolar cation/proton exchanger (CAX).	Enhanced Cd2+ -selective root-tonoplast-transport in tobaccos expressing Arabidopsis cation exchangers.2007 · DOI: 10.1007/s00425-006-0352-7
`At2g38170`	Vacuolar cation/proton exchanger (CAX).	The Arabidopsis cax1 mutant exhibits impaired ion homeostasis, development, and hormonal responses and reveals interplay among vacuolar transporters.2003 · DOI: 10.1105/tpc.007385 Mutations in the Ca2+/H+ transporter CAX1 increase CBF/DREB1 expression and the cold-acclimation response in Arabidopsis.2003 · DOI: 10.1105/tpc.015248 Functional association of Arabidopsis CAX1 and CAX3 is required for normal growth and ion homeostasis.2005 · DOI: 10.1104/pp.105.061218
`At3g51860`	Vacuolar cation/proton exchanger (CAX).	Functional association of Arabidopsis CAX1 and CAX3 is required for normal growth and ion homeostasis.2005 · DOI: 10.1104/pp.105.061218

Rice

Reference gene ID	Possible function	Papers / DOI
`Os01g0557500`	Vacuolar cation/proton exchanger (CAX).	Expression profile of the genes for rice cation/H+ exchanger family and functional analysis in yeast.2005 · DOI: 10.1093/pcp/pci173
`Os05g0594200`	Vacuolar cation/proton exchanger (CAX).	Expression profile of the genes for rice cation/H+ exchanger family and functional analysis in yeast.2005 · DOI: 10.1093/pcp/pci173

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006793	phosphorus metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.125; coverage=88.462; evalue=1.27e-145; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006812	monoatomic cation transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IMP:ComplexPortal	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006816	calcium ion transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006874	intracellular calcium ion homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.056; coverage=88.462; evalue=5.62e-153; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006882	intracellular zinc ion homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009624	response to nematode	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.125; coverage=88.462; evalue=1.27e-145; UniProt GO evidence=HEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009631	cold acclimation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009733	response to auxin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.056; coverage=88.462; evalue=5.62e-153; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010119	regulation of stomatal movement	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IMP:ComplexPortal	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010351	lithium ion transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IMP:ComplexPortal	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030026	intracellular manganese ion homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048364	root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.056; coverage=88.462; evalue=5.62e-153; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051592	response to calcium ion	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.125; coverage=88.462; evalue=1.27e-145; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0055062	phosphate ion homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0070588	calcium ion transmembrane transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.056; coverage=88.462; evalue=5.62e-153; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080136	priming of cellular response to stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.125; coverage=88.462; evalue=1.27e-145; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000325	plant-type vacuole	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.125; coverage=88.462; evalue=1.27e-145; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005773	vacuole	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005774	vacuolar membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.056; coverage=88.462; evalue=5.62e-153; UniProt GO evidence=IDA:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009705	plant-type vacuole membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.056; coverage=88.462; evalue=5.62e-153; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0061993	calcium:proton antiporter complex	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015368	calcium:monoatomic cation antiporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.056; coverage=88.462; evalue=5.62e-153; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015369	calcium:proton antiporter activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.056; coverage=88.462; evalue=5.62e-153; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G38170	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.204; coverage=90.95; evalue=1.37e-150	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G51860	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.125; coverage=88.462; evalue=1.27e-145	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G01490	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.056; coverage=88.462; evalue=5.62e-153	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os01g0557500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.881; coverage=87.33; evalue=1.58e-147	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os05g0594200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.355; coverage=85.294; evalue=4.3e-131	UniProtKB/Swiss-Prot DAT 2026 current_release