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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_000594
Query referenceOH1004
LocationChr01:10703529-10704434 (-)
DescriptionSimilar to CXIP4: CAX-interacting protein 4 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000594 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 6 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g28910 May regulate CAX1 cation transporter.
Characterization of CXIP4, a novel Arabidopsis protein that activates the H+/Ca2+ antiporter, CAX1.2004 · DOI: 10.1016/s0014-5793(04)00036-5

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006397mRNA processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.054; coverage=12.292; evalue=3.42e-07; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008380RNA splicingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.054; coverage=12.292; evalue=3.42e-07; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.778; coverage=41.86; evalue=3.37e-65; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.778; coverage=41.86; evalue=3.37e-65; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003676nucleic acid bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.778; coverage=41.86; evalue=3.37e-65; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.778; coverage=41.86; evalue=3.37e-65; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G28910KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.778; coverage=41.86; evalue=3.37e-65UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:285672KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.054; coverage=12.292; evalue=6.17e-07UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:67288KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.351; coverage=12.292; evalue=6.38e-07UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrno:361888KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.351; coverage=12.292; evalue=6.32e-07UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGxtr:548753KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.054; coverage=12.292; evalue=3.42e-07UniProtKB/Swiss-Prot DAT 2026 current_release