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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_000426
Query referenceOH1004
LocationChr01:8026651-8029384 (-)
DescriptionSimilar to NCA1: Protein NCA1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000426 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 18 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g54360 Has holdase chaperone activity that may fold catalase to a functional structure.
Catalase and NO CATALASE ACTIVITY1 promote autophagy-dependent cell death in Arabidopsis.2013 · DOI: 10.1105/tpc.113.117192
A chaperone function of NO CATALASE ACTIVITY1 is required to maintain catalase activity and for multiple stress responses in Arabidopsis.2015 · DOI: 10.1105/tpc.114.135095

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000122negative regulation of transcription by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=26.195; evalue=3.36e-06; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=26.195; evalue=3.36e-06; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006511ubiquitin-dependent protein catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.597; coverage=25.621; evalue=1.11e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016567protein ubiquitinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.597; coverage=25.621; evalue=1.11e-08; UniProt GO evidence=IEA:UniProtKB-UniPathwayUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043069negative regulation of programmed cell deathBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.119; coverage=77.247; evalue=9.45e-176; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0044818mitotic G2/M transition checkpointBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.597; coverage=25.621; evalue=1.11e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045814negative regulation of gene expression, epigeneticBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=26.195; evalue=3.36e-06; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051301cell divisionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.597; coverage=25.621; evalue=1.11e-08; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.119; coverage=77.247; evalue=9.45e-176; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.119; coverage=77.247; evalue=9.45e-176; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031519PcG protein complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=26.195; evalue=3.36e-06; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035102PRC1 complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=26.195; evalue=3.36e-06; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000166nucleotide bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.597; coverage=25.621; evalue=1.11e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004842ubiquitin-protein transferase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.597; coverage=25.621; evalue=1.11e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008047enzyme activator activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.119; coverage=77.247; evalue=9.45e-176; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.119; coverage=77.247; evalue=9.45e-176; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0061630ubiquitin protein ligase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.597; coverage=25.621; evalue=1.11e-08; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990841promoter-specific chromatin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=26.195; evalue=3.36e-06; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G54360KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.119; coverage=77.247; evalue=9.45e-176UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdre:394249KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=26.195; evalue=3.36e-06UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGxla:734287KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.597; coverage=25.621; evalue=1.11e-08UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGxtr:395009KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.167; coverage=22.945; evalue=7.55e-06UniProtKB/Swiss-Prot DAT 2026 current_release