Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_000283`
Query reference	OH1004
Location	Chr01:5240504-5247871 (-)
Description	Similar to GLU1: Ferredoxin-dependent glutamate synthase 1%2C chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000283 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 21 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g04140`	Involved in glutamate biosynthesis in leaf.	Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.1998 · DOI: 10.1105/tpc.10.5.741
`At2g41220`	May play a role in primary nitrogen assimilation in roots.	Assimilation of excess ammonium into amino acids and nitrogen translocation in Arabidopsis thaliana--roles of glutamate synthases and carbamoylphosphate synthetase in leaves.2009 · DOI: 10.1111/j.1742-4658.2009.07114.x Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.1998 · DOI: 10.1105/tpc.10.5.741

Rice

Reference gene ID	Possible function	Papers / DOI
`Os07g0658400`	Involved in glutamate biosynthesis in leaf.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006537	glutamate biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.002; coverage=99.877; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009416	response to light stimulus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009744	response to sucrose	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009853	photorespiration	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019676	ammonia assimilation cycle	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.002; coverage=99.877; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0097054	L-glutamate biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.002; coverage=99.877; evalue=0.0; UniProt GO evidence=IDA:CAFA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005759	mitochondrial matrix	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009536	plastid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.358; coverage=95.767; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009570	chloroplast stroma	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.002; coverage=99.877; evalue=0.0; UniProt GO evidence=IDA:CAFA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009941	chloroplast envelope	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048046	apoplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003729	mRNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008047	enzyme activator activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015930	glutamate synthase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.002; coverage=99.877; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016041	glutamate synthase (ferredoxin) activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.002; coverage=99.877; evalue=0.0; UniProt GO evidence=IDA:CAFA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019899	enzyme binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.002; coverage=99.877; evalue=0.0; UniProt GO evidence=IPI:CAFA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.002; coverage=99.877; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051538	3 iron, 4 sulfur cluster binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=82.002; coverage=99.877; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G41220	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=81.358; coverage=95.767; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G04140	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.154; coverage=99.693; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os07g0658400	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=82.236; coverage=96.012; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	zma:542710	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=82.844; coverage=94.049; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release