Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_000276`
Query reference	OH1004
Location	Chr01:5219320-5221527 (+)
Description	Similar to BZIP17: bZIP transcription factor 17 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000276 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 22 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g40950`	Transcriptional activator involved in salt and osmotic stress responses.	Salt stress responses in Arabidopsis utilize a signal transduction pathway related to endoplasmic reticulum stress signaling.2007 · DOI: 10.1111/j.1365-313x.2007.03195.x Signaling from the endoplasmic reticulum activates brassinosteroid signaling and promotes acclimation to stress in Arabidopsis.2010 · DOI: 10.1126/scisignal.2001140
`At3g10800`	Transcriptional activator involved in ER stress responses.	An endoplasmic reticulum stress response in Arabidopsis is mediated by proteolytic processing and nuclear relocation of a membrane-associated transcription factor, bZIP28.2007 · DOI: 10.1105/tpc.106.050021 Identification of an Arabidopsis transmembrane bZIP transcription factor involved in the endoplasmic reticulum stress response.2008 · DOI: 10.1016/j.bbrc.2008.07.021 A membrane-tethered transcription factor defines a branch of the heat stress response in Arabidopsis thaliana.2008 · DOI: 10.1073/pnas.0808463105 Signaling from the endoplasmic reticulum activates brassinosteroid signaling and promotes acclimation to stress in Arabidopsis.2010 · DOI: 10.1126/scisignal.2001140
`At3g56660`	Transcriptional activator involved in stress responses.	No verified direct reference in this release

Rice

Reference gene ID	Possible function	Papers / DOI
`Os05g0411300`	Transcription factor involved in endoplasmic reticulum (ER) stress response.	Signal transduction by IRE1-mediated splicing of bZIP50 and other stress sensors in the endoplasmic reticulum stress response of rice.2012 · DOI: 10.1111/j.1365-313x.2011.04844.x A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response.2012 · DOI: 10.1093/pcp/pcr157
`Os07g0644100`	Transcription factor involved in endoplasmic reticulum (ER) stress response.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006950	response to stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.193; coverage=103.134; evalue=1.09e-114; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006986	response to unfolded protein	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009408	response to heat	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030968	endoplasmic reticulum unfolded protein response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0034976	response to endoplasmic reticulum stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042538	hyperosmotic salinity response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045893	positive regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000139	Golgi membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005635	nuclear envelope	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005654	nucleoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048471	perinuclear region of cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043565	sequence-specific DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G40950	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.95; coverage=107.407; evalue=7.91e-157	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G10800	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.968; coverage=89.744; evalue=2.04e-116	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G56660	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.193; coverage=103.134; evalue=1.09e-114	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os05g0411300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.95; coverage=71.937; evalue=1.91e-97	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os07g0644100	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.04; coverage=70.513; evalue=1.28e-89	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4338781	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.95; coverage=71.937; evalue=1.91e-97	UniProtKB/Swiss-Prot DAT 2026 current_release