record_type input_id synteny_block_id query_reference target_reference query_gene target_gene query_chr query_start query_end target_chr target_start target_end gene_pair_count identity query_coverage target_coverage reciprocal_best_hit relationship_type confidence orientation note evidence_summary source_table block_summary JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 Chr08 87266151 88034379 Chr05 115617961 116360734 29 High + Formal JCVI synteny block from rebuilt ID map pipeline. Formal JCVI synteny block from rebuilt ID map pipeline. synteny_block block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G340410 LXL04_025706 Chr08 87266151 87266747 Chr05 115617961 115623556 96.9 96.465 56.083 0 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=96.900; qcov=96.465; tcov=56.083; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G340490 LXL04_025707 Chr08 87290136 87290699 Chr05 115630759 115632915 100.0 94.118 24.513 0 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=100.000; qcov=94.118; tcov=24.513; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G340500 LXL04_025708 Chr08 87293279 87298684 Chr05 115635444 115639851 98.3 96.678 29.664 0 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=98.300; qcov=96.678; tcov=29.664; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G340510 LXL04_025709 Chr08 87300160 87302392 Chr05 115641812 115642926 100.0 62.329 80.531 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=100.000; qcov=62.329; tcov=80.531; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G340530 LXL04_025710 Chr08 87313879 87314937 Chr05 115670456 115670928 100.0 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G340540 LXL04_025711 Chr08 87315717 87316776 Chr05 115671815 115672741 98.4 98.93 82.96 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=98.400; qcov=98.930; tcov=82.960; CDS_RBH=1; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G340560 LXL04_025712 Chr08 87319677 87322087 Chr05 115680124 115681569 99.2 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=99.200; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G340570 LXL04_025713 Chr08 87322428 87325136 Chr05 115682379 115684537 99.1 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=99.100; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G340620 LXL04_025714 Chr08 87336775 87340653 Chr05 115691877 115694901 99.0 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=99.000; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G340670 LXL04_025715 Chr08 87349611 87352858 Chr05 115704828 115707772 98.9 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=98.900; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341260 LXL04_025717 Chr08 87488738 87490274 Chr05 115805521 115806793 91.4 100.0 95.044 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=91.400; qcov=100.000; tcov=95.044; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341270 LXL04_025718 Chr08 87492183 87494532 Chr05 115809072 115810662 100.0 100.0 100.0 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341370 LXL04_025719 Chr08 87514772 87517475 Chr05 115825940 115828230 97.1 99.174 85.106 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=97.100; qcov=99.174; tcov=85.106; CDS_RBH=1; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341400 LXL04_025720 Chr08 87524767 87530507 Chr05 115841402 115845474 97.8 97.414 20.452 0 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=97.800; qcov=97.414; tcov=20.452; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341420 LXL04_025721 Chr08 87536179 87538620 Chr05 115851516 115853951 70.8 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=70.800; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341430 LXL04_025722 Chr08 87541994 87545593 Chr05 115857734 115859813 100.0 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341490 LXL04_025723 Chr08 87561666 87565503 Chr05 115876320 115888738 100.0 92.713 10.538 0 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=100.000; qcov=92.713; tcov=10.538; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341500 LXL04_025723 Chr08 87567157 87573268 Chr05 115876320 115888738 29.4 99.479 42.384 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=29.400; qcov=99.479; tcov=42.384; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341550 LXL04_025726 Chr08 87579377 87580989 Chr05 115914856 115915356 100.0 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341560 LXL04_025727 Chr08 87582092 87584891 Chr05 115916906 115919513 85.4 90.98 52.515 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=85.400; qcov=90.980; tcov=52.515; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G341610 LXL04_025728 Chr08 87602368 87603680 Chr05 115942780 115943624 86.8 98.78 96.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=86.800; qcov=98.780; tcov=96.000; CDS_RBH=1; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G342050 LXL04_025733 Chr08 87699050 87704837 Chr05 116038948 116041291 99.7 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G342070 LXL04_025735 Chr08 87715648 87722348 Chr05 116049018 116050957 99.8 100.0 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=0; protein_identity=99.800; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G342420 LXL04_025736 Chr08 87787021 87788065 Chr05 116114553 116115992 92.8 100.0 74.708 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=92.800; qcov=100.000; tcov=74.708; CDS_RBH=1; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G342490 LXL04_025739 Chr08 87809153 87811056 Chr05 116156274 116157837 100.0 96.838 87.814 1 RBH_high_identity_coverage_local_synteny_minor_chr_pair Probable category=probable_1to1; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=96.838; tcov=87.814; CDS_RBH=1; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G342740 LXL04_025740 Chr08 87853660 87856432 Chr05 116181513 116184096 100.0 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G342800 LXL04_025742 Chr08 87875682 87884863 Chr05 116203880 116205467 83.1 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=83.100; qcov=100.000; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G342910 LXL04_025744 Chr08 87916086 87922464 Chr05 116260353 116262399 100.0 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00340 id_converter_ready block_anchor JCVI_TKOH_00340 JCVI_TKOH_00340 TK1151 OH1004 TkA08G343450 LXL04_025745 Chr08 88025710 88034379 Chr05 116359355 116360734 99.7 99.457 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=minor_or_translocated_chromosome_pair; RBH=1; protein_identity=99.700; qcov=99.457; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00340 id_converter_ready