record_type input_id synteny_block_id query_reference target_reference query_gene target_gene query_chr query_start query_end target_chr target_start target_end gene_pair_count identity query_coverage target_coverage reciprocal_best_hit relationship_type confidence orientation note evidence_summary source_table block_summary JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 Chr05 30747195 32361941 Chr04 46673623 48183072 23 High mixed Formal JCVI synteny block from rebuilt ID map pipeline. Formal JCVI synteny block from rebuilt ID map pipeline. synteny_block block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G115160 LXL04_019996 Chr05 30747195 30761613 Chr04 46673623 46686225 88.2 99.631 99.468 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=88.200; qcov=99.631; tcov=99.468; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G115170 LXL04_019997 Chr05 30762186 30764623 Chr04 46687472 46689830 100.0 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G115510 LXL04_019998 Chr05 30817388 30823942 Chr04 46705116 46709615 95.3 80.556 97.623 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=95.300; qcov=80.556; tcov=97.623; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G115630 LXL04_019999 Chr05 30856401 30858370 Chr04 46869644 46871315 100.0 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G115970 LXL04_020000 Chr05 30939821 30942252 Chr04 46985601 46987574 97.7 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=97.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G116330 LXL04_020002 Chr05 31034887 31036451 Chr04 47098252 47103467 87.7 87.124 20.417 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=87.700; qcov=87.124; tcov=20.417; CDS_RBH=0; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G116590 LXL04_020002 Chr05 31089927 31096169 Chr04 47098252 47103467 92.0 100.0 97.812 1 RBH_sequence_supported Probable category=probable_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=92.000; qcov=100.000; tcov=97.812; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G116820 LXL04_020003 Chr05 31149326 31152270 Chr04 47194822 47197480 91.9 100.0 100.0 1 RBH_sequence_supported Probable category=probable_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=91.900; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G116880 LXL04_020004 Chr05 31166152 31167120 Chr04 47263720 47264493 98.0 100.0 79.767 1 RBH_sequence_supported Probable category=probable_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=98.000; qcov=100.000; tcov=79.767; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G117110 LXL04_020017 Chr05 31197266 31199032 Chr04 47576736 47579729 72.3 99.25 79.741 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=72.300; qcov=99.250; tcov=79.741; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G117410 LXL04_020010 Chr05 31267509 31267952 Chr04 47336684 47337600 90.4 92.517 50.752 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=90.400; qcov=92.517; tcov=50.752; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G117420 LXL04_020030 Chr05 31271474 31272019 Chr04 47880677 47881207 84.8 90.055 93.75 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=84.800; qcov=90.055; tcov=93.750; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G117740 LXL04_020026 Chr05 31338162 31339092 Chr04 47779748 47781577 79.8 97.906 62.258 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=79.800; qcov=97.906; tcov=62.258; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G117960 LXL04_020029 Chr05 31371191 31371532 Chr04 47811299 47811658 100.0 100.0 94.958 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=94.958; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G117980 LXL04_020030 Chr05 31379929 31380513 Chr04 47880677 47881207 73.3 89.944 100.0 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=73.300; qcov=89.944; tcov=100.000; CDS_RBH=0; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G118170 LXL04_020010 Chr05 31421726 31422052 Chr04 47336684 47337600 92.5 74.074 30.075 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=92.500; qcov=74.074; tcov=30.075; CDS_RBH=0; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G118180 LXL04_020030 Chr05 31425729 31426115 Chr04 47880677 47881207 88.2 99.219 72.159 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=88.200; qcov=99.219; tcov=72.159; CDS_RBH=0; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G118840 LXL04_020010 Chr05 31576555 31577043 Chr04 47336684 47337600 92.4 80.864 49.624 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=92.400; qcov=80.864; tcov=49.624; CDS_RBH=0; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G118850 LXL04_020030 Chr05 31580238 31580648 Chr04 47880677 47881207 77.8 86.029 66.477 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=77.800; qcov=86.029; tcov=66.477; CDS_RBH=0; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G121020 LXL04_020030 Chr05 32066227 32066595 Chr04 47880677 47881207 79.2 98.361 68.182 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=79.200; qcov=98.361; tcov=68.182; CDS_RBH=0; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G121990 LXL04_020033 Chr05 32275873 32279785 Chr04 48029306 48030411 98.9 55.108 100.0 1 sequence_supported_annotation_or_model_conflict Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=98.900; qcov=55.108; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G122250 LXL04_020041 Chr05 32330148 32332948 Chr04 48107529 48110080 95.6 100.0 100.0 1 multi_candidate_from_TK1151 Complex category=one_to_many; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=95.600; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready block_anchor JCVI_TKOH_00233 JCVI_TKOH_00233 TK1151 OH1004 TkA05G122460 LXL04_020043 Chr05 32360833 32361941 Chr04 48182177 48183072 99.6 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.600; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00233 id_converter_ready