record_type input_id synteny_block_id query_reference target_reference query_gene target_gene query_chr query_start query_end target_chr target_start target_end gene_pair_count identity query_coverage target_coverage reciprocal_best_hit relationship_type confidence orientation note evidence_summary source_table block_summary JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 Chr01 97523617 99472972 Chr01 65990088 68610188 29 High - Formal JCVI synteny block from rebuilt ID map pipeline. Formal JCVI synteny block from rebuilt ID map pipeline. synteny_block block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G390590 LXL04_003117 Chr01 97523617 97527426 Chr01 68450362 68453315 99.8 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.800; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G391110 LXL04_003124 Chr01 97662644 97663299 Chr01 68609533 68610188 100.0 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G391140 LXL04_003123 Chr01 97670886 97673618 Chr01 68599311 68601720 100.0 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G391150 LXL04_003122 Chr01 97674709 97677972 Chr01 68594930 68597974 100.0 99.399 94.034 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=99.399; tcov=94.034; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G391350 LXL04_003121 Chr01 97719428 97720099 Chr01 68552669 68553340 100.0 100.0 100.0 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G391370 LXL04_003120 Chr01 97720726 97722194 Chr01 68550660 68551857 100.0 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G392250 LXL04_003104 Chr01 97874116 97876887 Chr01 67681401 67683366 100.0 68.627 38.889 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=68.627; tcov=38.889; CDS_RBH=0; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G392530 LXL04_003103 Chr01 97943519 97944195 Chr01 67610214 67610893 99.3 100.0 71.642 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.300; qcov=100.000; tcov=71.642; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G393450 LXL04_003102 Chr01 98148345 98152019 Chr01 67414050 67418822 100.0 99.779 94.942 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=99.779; tcov=94.942; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G393460 LXL04_003101 Chr01 98152265 98162920 Chr01 67409005 67413358 99.5 97.068 80.432 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.500; qcov=97.068; tcov=80.432; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G393540 LXL04_003099 Chr01 98185567 98186591 Chr01 67384771 67385711 96.8 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=96.800; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G393600 LXL04_003098 Chr01 98198469 98202091 Chr01 67338230 67340852 99.7 99.86 90.932 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.700; qcov=99.860; tcov=90.932; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G394270 LXL04_003098 Chr01 98335839 98343543 Chr01 67338230 67340852 75.2 99.868 99.872 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=75.200; qcov=99.868; tcov=99.872; CDS_RBH=0; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G394300 LXL04_003094 Chr01 98353871 98358866 Chr01 67288723 67292555 99.6 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.600; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G394320 LXL04_003093 Chr01 98362541 98366405 Chr01 67283727 67286943 87.0 95.4 99.767 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=87.000; qcov=95.400; tcov=99.767; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G394590 LXL04_003092 Chr01 98413712 98415254 Chr01 67266001 67267308 99.3 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.300; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G394610 LXL04_003090 Chr01 98419106 98422330 Chr01 67253195 67255239 99.7 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G394630 LXL04_003089 Chr01 98427972 98432043 Chr01 67243193 67245707 99.7 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.700; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G394920 LXL04_003088 Chr01 98482961 98485133 Chr01 67189127 67192534 94.0 91.429 83.732 1 RBH_sequence_supported Probable category=probable_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=94.000; qcov=91.429; tcov=83.732; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G395140 LXL04_003087 Chr01 98541005 98543908 Chr01 67151403 67153296 100.0 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=100.000; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G395150 LXL04_003086 Chr01 98545128 98548338 Chr01 67146777 67149986 99.9 100.0 100.0 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.900; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G395780 LXL04_003085 Chr01 98697878 98700450 Chr01 67008302 67010909 90.4 87.407 77.64 0 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=90.400; qcov=87.407; tcov=77.640; CDS_RBH=0; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G396140 LXL04_003084 Chr01 98764907 98765911 Chr01 66921183 66923389 95.2 99.686 90.489 1 RBH_high_identity_coverage_synteny Strict category=strict_1to1; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=95.200; qcov=99.686; tcov=90.489; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G396350 LXL04_003082 Chr01 98821675 98823493 Chr01 66901538 66903905 98.5 100.0 76.744 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=98.500; qcov=100.000; tcov=76.744; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G396370 LXL04_003080 Chr01 98827768 98831322 Chr01 66894023 66897340 99.0 93.571 77.21 1 multi_candidate_from_TK1151 Complex category=one_to_many; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=99.000; qcov=93.571; tcov=77.210; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G397020 LXL04_003076 Chr01 99004959 99008747 Chr01 66724174 66727696 75.7 92.308 62.181 0 non_reciprocal_best_hit Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=0; protein_identity=75.700; qcov=92.308; tcov=62.181; CDS_RBH=0; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G397330 LXL04_003069 Chr01 99092248 99094743 Chr01 66477098 66478109 87.7 56.25 67.241 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=87.700; qcov=56.250; tcov=67.241; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G397630 LXL04_003066 Chr01 99158785 99163376 Chr01 66407867 66408865 98.9 100.0 100.0 1 multi_source_to_OH1004 Complex category=many_to_one; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=98.900; qcov=100.000; tcov=100.000; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready block_anchor JCVI_TKOH_00024 JCVI_TKOH_00024 TK1151 OH1004 TkA01G398330 LXL04_003062 Chr01 99358717 99370203 Chr01 66114829 66120904 98.7 53.726 43.683 1 RBH_below_probable_coverage_or_synteny_threshold Review category=annotation_conflict; chr_pair=dominant_chromosome_pair; RBH=1; protein_identity=98.700; qcov=53.726; tcov=43.683; CDS_RBH=1; JCVI=JCVI_TKOH_00024 id_converter_ready