query	query_gene_id	query_protein_id	source_reference	hit_rank	swissprot_acc	swissprot_entry	database_section	target_gene_id	description	organism	homolog_gene_name	percent_identity	alignment_length	query_coverage	evalue	bitscore	confidence	evidence_type	source_db	reference_gene_id	reference_function_zh	reference_function_en	reference_papers_json
TkA04G129610	TkA04G129610	TkA04G129610.1	TK1151	1	O22446	HDA19_ARATH	Swiss-Prot		sp|O22446|HDA19_ARATH Histone deacetylase 19	Arabidopsis thaliana	HDA19	80.2	489	98.384	1.08e-291	800.0	High	TK1151 direct protein BLASTP	UniProt Swiss-Prot local database (DIAMOND)	At4g38130	催化核心组蛋白H2A、H2B、H3和H4的N端赖氨酸残基去乙酰化。	Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4).	"[{""pmid"":""11117260"",""title"":""Functional analysis of a RPD3 histone deacetylase homologue in Arabidopsis thaliana."",""doi"":""10.1023/a:1006498413543"",""url"":""https://pubmed.ncbi.nlm.nih.gov/11117260/"",""year"":""2000"",""journal"":""Plant molecular biology"",""authors"":""Wu K, Malik K, Tian L, Brown D, Miki B."",""matched_aliases"":[""AtRPD3A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""15749761"",""title"":""HISTONE DEACETYLASE19 is involved in jasmonic acid and ethylene signaling of pathogen response in Arabidopsis."",""doi"":""10.1105/tpc.104.028514"",""url"":""https://pubmed.ncbi.nlm.nih.gov/15749761/"",""year"":""2005"",""journal"":""The Plant cell"",""authors"":""Zhou C, Zhang L, Duan J, Miki B, Wu K."",""matched_aliases"":[""AtRPD3A"",""HDA19""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""16699543"",""title"":""Arabidopsis thaliana histone deacetylase 1 (AtHD1) is localized in euchromatic regions and demonstrates histone deacetylase activity in vitro."",""doi"":""10.1038/sj.cr.7310059"",""url"":""https://pubmed.ncbi.nlm.nih.gov/16699543/"",""year"":""2006"",""journal"":""Cell research"",""authors"":""Fong PM, Tian L, Chen ZJ."",""matched_aliases"":[""AtHDA19""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""23034631"",""title"":""APETALA2 negatively regulates multiple floral organ identity genes in Arabidopsis by recruiting the co-repressor TOPLESS and the histone deacetylase HDA19."",""doi"":""10.1242/dev.085407"",""url"":""https://pubmed.ncbi.nlm.nih.gov/23034631/"",""year"":""2012"",""journal"":""Development (Cambridge, England)"",""authors"":""Krogan NT, Hogan K, Long JA."",""matched_aliases"":[""HDA19""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""29018096"",""title"":""The Distinct Roles of Class I and II RPD3-Like Histone Deacetylases in Salinity Stress Response."",""doi"":""10.1104/pp.17.01332"",""url"":""https://pubmed.ncbi.nlm.nih.gov/29018096/"",""year"":""2017"",""journal"":""Plant physiology"",""authors"":""Ueda M, Matsui A, Tanaka M, Nakamura T, Abe T, Sako K, Sasaki T, Kim JM, Ito A, Nishino N, Shimada H, Yoshida M, Seki M."",""matched_aliases"":[""HDA19""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false}]"
TkA04G129610	TkA04G129610	TkA04G129610.1	TK1151	2	Q7Y0Y8	HDAC1_ORYSJ	Swiss-Prot		sp|Q7Y0Y8|HDAC1_ORYSJ Histone deacetylase 1	Oryza sativa subsp. japonica	HDAC1	89.3	402	81.01	1.31e-273	755.0	High	TK1151 direct protein BLASTP	UniProt Swiss-Prot local database (DIAMOND)	Os06g0583400	催化核心组蛋白H2A、H2B、H3和H4的N端赖氨酸残基去乙酰化。	Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4).	"[{""pmid"":""12581311"",""title"":""Structure and expression of the rice class-I type histone deacetylase genes OsHDAC1-3: OsHDAC1 overexpression in transgenic plants leads to increased growth rate and altered architecture."",""doi"":""10.1046/j.1365-313x.2003.01650.x"",""url"":""https://pubmed.ncbi.nlm.nih.gov/12581311/"",""year"":""2003"",""journal"":""The Plant journal : for cell and molecular biology"",""authors"":""Jang IC; Pahk YM; Song SI; Kwon HJ; Nahm BH; Kim JK"",""matched_aliases"":[""HDAC1"",""OsHDAC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""19453457"",""title"":""The histone deacetylase OsHDAC1 epigenetically regulates the OsNAC6 gene that controls seedling root growth in rice."",""doi"":""10.1111/j.1365-313x.2009.03908.x"",""url"":""https://pubmed.ncbi.nlm.nih.gov/19453457/"",""year"":""2009"",""journal"":""The Plant journal : for cell and molecular biology"",""authors"":""Chung PJ, Kim YS, Jeong JS, Park SH, Nahm BH, Kim JK."",""matched_aliases"":[""OsHDAC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""27468891"",""title"":""MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice."",""doi"":""10.1105/tpc.16.00171"",""url"":""https://pubmed.ncbi.nlm.nih.gov/27468891/"",""year"":""2016"",""journal"":""The Plant cell"",""authors"":""Tang N, Ma S, Zong W, Yang N, Lv Y, Yan C, Guo Z, Li J, Li X, Xiang Y, Song H, Xiao J, Li X, Xiong L."",""matched_aliases"":[""HDA702""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false}]"
TkA04G129610	TkA04G129610	TkA04G129610.1	TK1151	4	Q6YV04	HDAC2_ORYSJ	Swiss-Prot		sp|Q6YV04|HDAC2_ORYSJ Histone deacetylase 2	Oryza sativa subsp. japonica	HDAC2	81.5	405	81.01	6.5e-253	702.0	High	TK1151 direct protein BLASTP	UniProt Swiss-Prot local database (DIAMOND)	Os02g0215200	催化核心组蛋白H2A、H2B、H3和H4的N端赖氨酸残基去乙酰化。	Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4).	[]
TkA04G129610	TkA04G129610	TkA04G129610.1	TK1151	5	Q7Y0Y6	HDAC3_ORYSJ	Swiss-Prot		sp|Q7Y0Y6|HDAC3_ORYSJ Histone deacetylase 3	Oryza sativa subsp. japonica	HDAC3	80.7	405	81.01	1.49e-249	694.0	High	TK1151 direct protein BLASTP	UniProt Swiss-Prot local database (DIAMOND)	Os02g0214900	催化核心组蛋白H2A、H2B、H3和H4的N端赖氨酸残基去乙酰化。	Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4).	[]