query	query_gene_id	query_protein_id	source_reference	hit_rank	swissprot_acc	swissprot_entry	database_section	target_gene_id	description	organism	homolog_gene_name	percent_identity	alignment_length	query_coverage	evalue	bitscore	confidence	evidence_type	source_db	reference_gene_id	reference_function_zh	reference_function_en	reference_papers_json
TkA04G023980	TkA04G023980	TkA04G023980.1	TK1151	1	Q9SZD4	PRS4A_ARATH	Swiss-Prot		sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A	Arabidopsis thaliana	RPT2A	95.0	444	100.0	4.68e-295	804.0	High	TK1151 direct protein BLASTP	UniProt Swiss-Prot local database (DIAMOND)	At4g29040	26S 蛋白酶参与泛素化蛋白的 ATP 依赖性降解。	The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins.	"[{""pmid"":""15073153"",""title"":""The HALTED ROOT gene encoding the 26S proteasome subunit RPT2a is essential for the maintenance of Arabidopsis meristems."",""doi"":""10.1242/dev.01096"",""url"":""https://pubmed.ncbi.nlm.nih.gov/15073153/"",""year"":""2004"",""journal"":""Development (Cambridge, England)"",""authors"":""Ueda M; Matsui K; Ishiguro S; Sano R; Wada T; Paponov I; Palme K; Okada K"",""matched_aliases"":[""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""17971041"",""title"":""26S proteasome regulatory particle mutants have increased oxidative stress tolerance."",""doi"":""10.1111/j.1365-313x.2007.03322.x"",""url"":""https://pubmed.ncbi.nlm.nih.gov/17971041/"",""year"":""2008"",""journal"":""The Plant journal : for cell and molecular biology"",""authors"":""Kurepa J, Toh-E A, Smalle JA."",""matched_aliases"":[""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""19321709"",""title"":""Loss of 26S proteasome function leads to increased cell size and decreased cell number in Arabidopsis shoot organs."",""doi"":""10.1104/pp.109.135970"",""url"":""https://pubmed.ncbi.nlm.nih.gov/19321709/"",""year"":""2009"",""journal"":""Plant physiology"",""authors"":""Kurepa J, Wang S, Li Y, Zaitlin D, Pierce AJ, Smalle JA."",""matched_aliases"":[""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""19500299"",""title"":""Regulation of leaf organ size by the Arabidopsis RPT2a 19S proteasome subunit."",""doi"":""10.1111/j.1365-313x.2009.03932.x"",""url"":""https://pubmed.ncbi.nlm.nih.gov/19500299/"",""year"":""2009"",""journal"":""The Plant journal : for cell and molecular biology"",""authors"":""Sonoda Y; Sako K; Maki Y; Yamazaki N; Yamamoto H; Ikeda A; Yamaguchi J"",""matched_aliases"":[""AtRPT2A"",""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""20195883"",""title"":""Control of endoreduplication of trichome by RPT2a, a subunit of the 19S proteasome in Arabidopsis."",""doi"":""10.1007/s10265-010-0321-x"",""url"":""https://pubmed.ncbi.nlm.nih.gov/20195883/"",""year"":""2010"",""journal"":""Journal of plant research"",""authors"":""Sako K; Maki Y; Aoyama T; Goto DB; Yamaguchi J"",""matched_aliases"":[""AtRPT2A"",""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""21389614"",""title"":""Arabidopsis thaliana 26S proteasome subunits RPT2a and RPT5a are crucial for zinc deficiency-tolerance."",""doi"":""10.1271/bbb.100794"",""url"":""https://pubmed.ncbi.nlm.nih.gov/21389614/"",""year"":""2011"",""journal"":""Bioscience, biotechnology, and biochemistry"",""authors"":""Sakamoto T; Kamiya T; Sako K; Yamaguchi J; Yamagami M; Fujiwara T"",""matched_aliases"":[""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""21784786"",""title"":""Arabidopsis RPT2a encoding the 26S proteasome subunit is required for various aspects of root meristem maintenance, and regulates gametogenesis redundantly with its homolog, RPT2b."",""doi"":""10.1093/pcp/pcr093"",""url"":""https://pubmed.ncbi.nlm.nih.gov/21784786/"",""year"":""2011"",""journal"":""Plant & cell physiology"",""authors"":""Ueda M, Matsui K, Ishiguro S, Kato T, Tabata S, Kobayashi M, Seki M, Shinozaki K, Okada K."",""matched_aliases"":[""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""21791544"",""title"":""RPT2a, a 26S proteasome AAA-ATPase, is directly involved in Arabidopsis CC-NBS-LRR protein uni-1D-induced signaling pathways."",""doi"":""10.1093/pcp/pcr099"",""url"":""https://pubmed.ncbi.nlm.nih.gov/21791544/"",""year"":""2011"",""journal"":""Plant & cell physiology"",""authors"":""Chung K; Tasaka M"",""matched_aliases"":[""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""22158466"",""title"":""The RPT2 subunit of the 26S proteasome directs complex assembly, histone dynamics, and gametophyte and sporophyte development in Arabidopsis."",""doi"":""10.1105/tpc.111.089482"",""url"":""https://pubmed.ncbi.nlm.nih.gov/22158466/"",""year"":""2011"",""journal"":""The Plant cell"",""authors"":""Lee KH, Minami A, Marshall RS, Book AJ, Farmer LM, Walker JM, Vierstra RD."",""matched_aliases"":[""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""22577987"",""title"":""RPN1a, a 26S proteasome subunit, is required for innate immunity in Arabidopsis."",""doi"":""10.1111/j.1365-313x.2012.05048.x"",""url"":""https://pubmed.ncbi.nlm.nih.gov/22577987/"",""year"":""2012"",""journal"":""The Plant journal : for cell and molecular biology"",""authors"":""Yao C; Wu Y; Nie H; Tang D"",""matched_aliases"":[""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""22615900"",""title"":""Arabidopsis RPT2a, 19S proteasome subunit, regulates gene silencing via DNA methylation."",""doi"":""10.1371/journal.pone.0037086"",""url"":""https://pubmed.ncbi.nlm.nih.gov/22615900/"",""year"":""2012"",""journal"":""PloS one"",""authors"":""Sako K; Maki Y; Kanai T; Kato E; Maekawa S; Yasuda S; Sato T; Watahiki MK; Yamaguchi J"",""matched_aliases"":[""AtRPT2A"",""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""24846764"",""title"":""Proteomic analysis of the 26S proteasome reveals its direct interaction with transit peptides of plastid protein precursors for their degradation."",""doi"":""10.1021/pr401245g"",""url"":""https://pubmed.ncbi.nlm.nih.gov/24846764/"",""year"":""2014"",""journal"":""Journal of proteome research"",""authors"":""Sako K; Yanagawa Y; Kanai T; Sato T; Seki M; Fujiwara M; Fukao Y; Yamaguchi J"",""matched_aliases"":[""RPT2A""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false}]"
TkA04G023980	TkA04G023980	TkA04G023980.1	TK1151	2	Q9SL67	PRS4B_ARATH	Swiss-Prot		sp|Q9SL67|PRS4B_ARATH 26S proteasome regulatory subunit 4 homolog B	Arabidopsis thaliana	RPT2B	94.6	444	100.0	7.75e-294	801.0	High	TK1151 direct protein BLASTP	UniProt Swiss-Prot local database (DIAMOND)	At2g20140	26S 蛋白酶参与泛素化蛋白的 ATP 依赖性降解。	The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins.	"[{""pmid"":""21784786"",""title"":""Arabidopsis RPT2a encoding the 26S proteasome subunit is required for various aspects of root meristem maintenance, and regulates gametogenesis redundantly with its homolog, RPT2b."",""doi"":""10.1093/pcp/pcr093"",""url"":""https://pubmed.ncbi.nlm.nih.gov/21784786/"",""year"":""2011"",""journal"":""Plant & cell physiology"",""authors"":""Ueda M, Matsui K, Ishiguro S, Kato T, Tabata S, Kobayashi M, Seki M, Shinozaki K, Okada K."",""matched_aliases"":[""RPT2B""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""22158466"",""title"":""The RPT2 subunit of the 26S proteasome directs complex assembly, histone dynamics, and gametophyte and sporophyte development in Arabidopsis."",""doi"":""10.1105/tpc.111.089482"",""url"":""https://pubmed.ncbi.nlm.nih.gov/22158466/"",""year"":""2011"",""journal"":""The Plant cell"",""authors"":""Lee KH, Minami A, Marshall RS, Book AJ, Farmer LM, Walker JM, Vierstra RD."",""matched_aliases"":[""RPT2B""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false}]"
TkA04G023980	TkA04G023980	TkA04G023980.1	TK1151	3	P46466	PRS4_ORYSJ	Swiss-Prot		sp|P46466|PRS4_ORYSJ 26S proteasome regulatory subunit 4 homolog	Oryza sativa subsp. japonica	TBP2	91.3	448	100.0	1.16e-287	785.0	High	TK1151 direct protein BLASTP	UniProt Swiss-Prot local database (DIAMOND)	Os07g0691800	26S 蛋白酶体参与泛素化蛋白的 ATP 依赖性降解。	The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins.	[]