query	query_gene_id	query_protein_id	source_reference	hit_rank	swissprot_acc	swissprot_entry	database_section	target_gene_id	description	organism	homolog_gene_name	percent_identity	alignment_length	query_coverage	evalue	bitscore	confidence	evidence_type	source_db	reference_gene_id	reference_function_zh	reference_function_en	reference_papers_json
LXL04_001956	gene-LXL04_001956	KAL4589054.1	OH-1004	1	O04017	NAC98_ARATH	Swiss-Prot		Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1	Arabidopsis thaliana	NAC098	49.502	402	100.0	1.03e-104	315.0	moderate_database_homology	BLASTP to reviewed UniProt Swiss-Prot	UniProt Swiss-Prot current_release 2026-06-10	At5g53950	STM 和 KNAT6 转录激活剂。	Transcription activator of STM and KNAT6.	"[{""pmid"":""10079219"",""title"":""Shoot apical meristem and cotyledon formation during Arabidopsis embryogenesis: interaction among the CUP-SHAPED COTYLEDON and SHOOT MERISTEMLESS genes."",""doi"":""10.1242/dev.126.8.1563"",""url"":""https://pubmed.ncbi.nlm.nih.gov/10079219/"",""year"":""1999"",""journal"":""Development (Cambridge, England)"",""authors"":""Aida M, Ishida T, Tasaka M."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""10750709"",""title"":""Involvement of CUP-SHAPED COTYLEDON genes in gynoecium and ovule development in Arabidopsis thaliana."",""doi"":""10.1093/pcp/41.1.60"",""url"":""https://pubmed.ncbi.nlm.nih.gov/10750709/"",""year"":""2000"",""journal"":""Plant & cell physiology"",""authors"":""Ishida T, Aida M, Takada S, Tasaka M."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""12163400"",""title"":""Roles of PIN-FORMED1 and MONOPTEROS in pattern formation of the apical region of the Arabidopsis embryo."",""doi"":""10.1242/dev.129.17.3965"",""url"":""https://pubmed.ncbi.nlm.nih.gov/12163400/"",""year"":""2002"",""journal"":""Development (Cambridge, England)"",""authors"":""Aida M, Vernoux T, Furutani M, Traas J, Tasaka M."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""12610213"",""title"":""The CUP-SHAPED COTYLEDON genes promote adventitious shoot formation on calli."",""doi"":""10.1093/pcp/pcg038"",""url"":""https://pubmed.ncbi.nlm.nih.gov/12610213/"",""year"":""2003"",""journal"":""Plant & cell physiology"",""authors"":""Daimon Y, Takabe K, Tasaka M."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""15202996"",""title"":""MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs."",""doi"":""10.1016/j.cub.2004.06.022"",""url"":""https://pubmed.ncbi.nlm.nih.gov/15202996/"",""year"":""2004"",""journal"":""Current biology : CB"",""authors"":""Mallory AC, Dugas DV, Bartel DP, Bartel B."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""15294871"",""title"":""MicroRNA regulation of the CUC genes is required for boundary size control in Arabidopsis meristems."",""doi"":""10.1242/dev.01320"",""url"":""https://pubmed.ncbi.nlm.nih.gov/15294871/"",""year"":""2004"",""journal"":""Development (Cambridge, England)"",""authors"":""Laufs P, Peaucelle A, Morin H, Traas J."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""15723790"",""title"":""The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis."",""doi"":""10.1016/j.cub.2005.02.017"",""url"":""https://pubmed.ncbi.nlm.nih.gov/15723790/"",""year"":""2005"",""journal"":""Current biology : CB"",""authors"":""Baker CC, Sieber P, Wellmer F, Meyerowitz EM."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""16798887"",""title"":""KNAT6: an Arabidopsis homeobox gene involved in meristem activity and organ separation."",""doi"":""10.1105/tpc.106.041988"",""url"":""https://pubmed.ncbi.nlm.nih.gov/16798887/"",""year"":""2006"",""journal"":""The Plant cell"",""authors"":""Belles-Boix E, Hamant O, Witiak SM, Morin H, Traas J, Pautot V."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""17098808"",""title"":""The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis."",""doi"":""10.1105/tpc.106.045617"",""url"":""https://pubmed.ncbi.nlm.nih.gov/17098808/"",""year"":""2006"",""journal"":""The Plant cell"",""authors"":""Nikovics K, Blein T, Peaucelle A, Ishida T, Morin H, Aida M, Laufs P."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""17122068"",""title"":""Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation."",""doi"":""10.1105/tpc.106.045716"",""url"":""https://pubmed.ncbi.nlm.nih.gov/17122068/"",""year"":""2006"",""journal"":""The Plant cell"",""authors"":""Hibara K, Karim MR, Takada S, Taoka K, Furutani M, Aida M, Tasaka M."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""17251269"",""title"":""Plants expressing a miR164-resistant CUC2 gene reveal the importance of post-meristematic maintenance of phyllotaxy in Arabidopsis."",""doi"":""10.1242/dev.02774"",""url"":""https://pubmed.ncbi.nlm.nih.gov/17251269/"",""year"":""2007"",""journal"":""Development (Cambridge, England)"",""authors"":""Peaucelle A, Morin H, Traas J, Laufs P."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""17287247"",""title"":""Redundancy and specialization among plant microRNAs: role of the MIR164 family in developmental robustness."",""doi"":""10.1242/dev.02817"",""url"":""https://pubmed.ncbi.nlm.nih.gov/17287247/"",""year"":""2007"",""journal"":""Development (Cambridge, England)"",""authors"":""Sieber P, Wellmer F, Gheyselinck J, Riechmann JL, Meyerowitz EM."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""9212461"",""title"":""Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant."",""doi"":""10.1105/tpc.9.6.841"",""url"":""https://pubmed.ncbi.nlm.nih.gov/9212461/"",""year"":""1997"",""journal"":""The Plant cell"",""authors"":""Aida M, Ishida T, Fukaki H, Fujisawa H, Tasaka M."",""matched_aliases"":[""CUC2""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false}]"
LXL04_001956	gene-LXL04_001956	KAL4589054.1	OH-1004	2	Q9FRV4	NAC54_ARATH	Swiss-Prot		Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1	Arabidopsis thaliana	NAC054	55.078	256	70.137	9.03e-88	270.0	strong_database_homology	BLASTP to reviewed UniProt Swiss-Prot	UniProt Swiss-Prot current_release 2026-06-10	At3g15170	STM 和 KNAT6 转录激活剂。	Transcription activator of STM and KNAT6.	"[{""pmid"":""10079219"",""title"":""Shoot apical meristem and cotyledon formation during Arabidopsis embryogenesis: interaction among the CUP-SHAPED COTYLEDON and SHOOT MERISTEMLESS genes."",""doi"":""10.1242/dev.126.8.1563"",""url"":""https://pubmed.ncbi.nlm.nih.gov/10079219/"",""year"":""1999"",""journal"":""Development (Cambridge, England)"",""authors"":""Aida M, Ishida T, Tasaka M."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""10750709"",""title"":""Involvement of CUP-SHAPED COTYLEDON genes in gynoecium and ovule development in Arabidopsis thaliana."",""doi"":""10.1093/pcp/41.1.60"",""url"":""https://pubmed.ncbi.nlm.nih.gov/10750709/"",""year"":""2000"",""journal"":""Plant & cell physiology"",""authors"":""Ishida T, Aida M, Takada S, Tasaka M."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""11245578"",""title"":""The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation."",""doi"":""10.1242/dev.128.7.1127"",""url"":""https://pubmed.ncbi.nlm.nih.gov/11245578/"",""year"":""2001"",""journal"":""Development (Cambridge, England)"",""authors"":""Takada S; Hibara K; Ishida T; Tasaka M"",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""12163400"",""title"":""Roles of PIN-FORMED1 and MONOPTEROS in pattern formation of the apical region of the Arabidopsis embryo."",""doi"":""10.1242/dev.129.17.3965"",""url"":""https://pubmed.ncbi.nlm.nih.gov/12163400/"",""year"":""2002"",""journal"":""Development (Cambridge, England)"",""authors"":""Aida M, Vernoux T, Furutani M, Traas J, Tasaka M."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""12492830"",""title"":""Developmental events and shoot apical meristem gene expression patterns during shoot development in Arabidopsis thaliana."",""doi"":""10.1046/j.1365-313x.2002.01479.x"",""url"":""https://pubmed.ncbi.nlm.nih.gov/12492830/"",""year"":""2002"",""journal"":""The Plant journal : for cell and molecular biology"",""authors"":""Cary AJ, Che P, Howell SH."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""12610213"",""title"":""The CUP-SHAPED COTYLEDON genes promote adventitious shoot formation on calli."",""doi"":""10.1093/pcp/pcg038"",""url"":""https://pubmed.ncbi.nlm.nih.gov/12610213/"",""year"":""2003"",""journal"":""Plant & cell physiology"",""authors"":""Daimon Y, Takabe K, Tasaka M."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""12787253"",""title"":""Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis."",""doi"":""10.1046/j.1365-313x.2003.01759.x"",""url"":""https://pubmed.ncbi.nlm.nih.gov/12787253/"",""year"":""2003"",""journal"":""The Plant journal : for cell and molecular biology"",""authors"":""Hiratsu K; Matsui K; Koyama T; Ohme-Takagi M"",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""14617069"",""title"":""CUC1 gene activates the expression of SAM-related genes to induce adventitious shoot formation."",""doi"":""10.1046/j.1365-313x.2003.01911.x"",""url"":""https://pubmed.ncbi.nlm.nih.gov/14617069/"",""year"":""2003"",""journal"":""The Plant journal : for cell and molecular biology"",""authors"":""Hibara K; Takada S; Tasaka M"",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed""],""fulltext_reviewed"":false},{""pmid"":""15202996"",""title"":""MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs."",""doi"":""10.1016/j.cub.2004.06.022"",""url"":""https://pubmed.ncbi.nlm.nih.gov/15202996/"",""year"":""2004"",""journal"":""Current biology : CB"",""authors"":""Mallory AC, Dugas DV, Bartel DP, Bartel B."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""15294871"",""title"":""MicroRNA regulation of the CUC genes is required for boundary size control in Arabidopsis meristems."",""doi"":""10.1242/dev.01320"",""url"":""https://pubmed.ncbi.nlm.nih.gov/15294871/"",""year"":""2004"",""journal"":""Development (Cambridge, England)"",""authors"":""Laufs P, Peaucelle A, Morin H, Traas J."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""15723790"",""title"":""The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis."",""doi"":""10.1016/j.cub.2005.02.017"",""url"":""https://pubmed.ncbi.nlm.nih.gov/15723790/"",""year"":""2005"",""journal"":""Current biology : CB"",""authors"":""Baker CC, Sieber P, Wellmer F, Meyerowitz EM."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""16798887"",""title"":""KNAT6: an Arabidopsis homeobox gene involved in meristem activity and organ separation."",""doi"":""10.1105/tpc.106.041988"",""url"":""https://pubmed.ncbi.nlm.nih.gov/16798887/"",""year"":""2006"",""journal"":""The Plant cell"",""authors"":""Belles-Boix E, Hamant O, Witiak SM, Morin H, Traas J, Pautot V."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""17122068"",""title"":""Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation."",""doi"":""10.1105/tpc.106.045716"",""url"":""https://pubmed.ncbi.nlm.nih.gov/17122068/"",""year"":""2006"",""journal"":""The Plant cell"",""authors"":""Hibara K, Karim MR, Takada S, Taoka K, Furutani M, Aida M, Tasaka M."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""17287247"",""title"":""Redundancy and specialization among plant microRNAs: role of the MIR164 family in developmental robustness."",""doi"":""10.1242/dev.02817"",""url"":""https://pubmed.ncbi.nlm.nih.gov/17287247/"",""year"":""2007"",""journal"":""Development (Cambridge, England)"",""authors"":""Sieber P, Wellmer F, Gheyselinck J, Riechmann JL, Meyerowitz EM."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false},{""pmid"":""9212461"",""title"":""Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant."",""doi"":""10.1105/tpc.9.6.841"",""url"":""https://pubmed.ncbi.nlm.nih.gov/9212461/"",""year"":""1997"",""journal"":""The Plant cell"",""authors"":""Aida M, Ishida T, Fukaki H, Fujisawa H, Tasaka M."",""matched_aliases"":[""CUC1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false}]"
LXL04_001956	gene-LXL04_001956	KAL4589054.1	OH-1004	3	Q9FLJ2	NC100_ARATH	Swiss-Prot		NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1	Arabidopsis thaliana	NAC100	50.163	307	84.11	8.23e-87	268.0	strong_database_homology	BLASTP to reviewed UniProt Swiss-Prot	UniProt Swiss-Prot current_release 2026-06-10	At5g61430	结合于参与叶绿素分解过程基因的启动子区域，如NYC1、SGR1、SGR2和PAO。	Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO.	[]
LXL04_001956	gene-LXL04_001956	KAL4589054.1	OH-1004	4	Q9FLR3	NAC79_ARATH	Swiss-Prot		NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1	Arabidopsis thaliana	NAC079	54.613	271	72.877	9.35e-85	263.0	strong_database_homology	BLASTP to reviewed UniProt Swiss-Prot	UniProt Swiss-Prot current_release 2026-06-10	At5g07680	含NAC结构域的蛋白79。	NAC domain-containing protein 79.	[]
LXL04_001956	gene-LXL04_001956	KAL4589054.1	OH-1004	5	Q9LJW3	NAC59_ARATH	Swiss-Prot		NAC domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN=NAC59 PE=1 SV=1	Arabidopsis thaliana	NAC59	42.091	373	99.726	7.86e-79	247.0	moderate_database_homology	BLASTP to reviewed UniProt Swiss-Prot	UniProt Swiss-Prot current_release 2026-06-10	At3g29035	转录激活剂，可与特定二分基序 5'-[AG]CGT[AG][AG][CT]ACGCAA-3' 上靶基因启动子中的 DNA 结合。	Transcription activator that binds to DNA in promoters of target genes on a specific bipartite motif 5'-[AG]CGT[AG](4- 5n)[AG][CT]ACGCAA-3'.	"[{""pmid"":""21303842"",""title"":""ORS1, an H₂O₂-responsive NAC transcription factor, controls senescence in Arabidopsis thaliana."",""doi"":""10.1093/mp/ssq080"",""url"":""https://pubmed.ncbi.nlm.nih.gov/21303842/"",""year"":""2011"",""journal"":""Molecular plant"",""authors"":""Balazadeh S, Kwasniewski M, Caldana C, Mehrnia M, Zanor MI, Xue GP, Mueller-Roeber B."",""matched_aliases"":[""ORS1""],""evidence"":""UniProt FUNCTION; UniProt/PubMed metadata and gene/species abstract checks; EuropePMC cross-check where available"",""metadata_sources"":[""UniProt"",""PubMed"",""EuropePMC""],""fulltext_reviewed"":false}]"