query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA06G477730	TkA06G477730	function	TkA06G477730	Similar to LHY: Protein LHY (Arabidopsis thaliana OX%3D3702)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0006351	DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0006355	regulation of DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0007623	circadian rhythm	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0009408	response to heat	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.839; coverage=120.858; evalue=1.9e-74; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0009409	response to cold	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0010378	temperature compensation of the circadian clock	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.839; coverage=120.858; evalue=1.9e-74; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0010468	regulation of gene expression	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.839; coverage=120.858; evalue=1.9e-74; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0010597	green leaf volatile biosynthetic process	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.156; coverage=21.248; evalue=2.06e-47; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0042752	regulation of circadian rhythm	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0042754	negative regulation of circadian rhythm	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0043254	regulation of protein-containing complex assembly	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.839; coverage=120.858; evalue=1.9e-74; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0045892	negative regulation of DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.839; coverage=120.858; evalue=1.9e-74; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0045893	positive regulation of DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.839; coverage=120.858; evalue=1.9e-74; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0048574	long-day photoperiodism, flowering	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0005634	nucleus	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0000976	transcription cis-regulatory region binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0000987	cis-regulatory region sequence-specific DNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.839; coverage=120.858; evalue=1.9e-74; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0003677	DNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.839; coverage=120.858; evalue=1.9e-74; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0003700	DNA-binding transcription factor activity	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	GO	GO:0043565	sequence-specific DNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.839; coverage=120.858; evalue=1.9e-74; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	KEGG	ath:AT1G01060	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.28; coverage=125.341; evalue=1.46e-80	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	KEGG	ath:AT2G46830	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.839; coverage=120.858; evalue=1.9e-74	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	KEGG	dosa:Os08g0157600	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=81.731; coverage=20.273; evalue=1.27e-40	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_022535	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G477730	TkA06G477730	organism_homology	Q6R0H1	sp|Q6R0H1|LHY_ARATH Protein LHY	Arabidopsis thaliana	identity=82.8; coverage=19.394; evalue=4.98e-23; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA06G477730; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA06G477730			False
TkA06G477730	TkA06G477730	organism_homology	A0A0P0XBU0	sp|A0A0P0XBU0|CCA1_ORYSJ Protein CCA1	Oryza sativa subsp. japonica	identity=75.4; coverage=19.697; evalue=2.12e-20; rank=3	TK1151 Swiss-Prot homology; source_gene=TkA06G477730; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA06G477730			False
TkA06G477730	TkA06G477730	reference_gene_function	At1g01060	参与生物钟的转录因子。	Arabidopsis	暂无已核实直接文献							
TkA06G477730	TkA06G477730	reference_gene_literature	At2g46830	参与生物钟和光敏色素调节的转录因子。	Arabidopsis	Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock.; PMID=11486091; DOI=10.1126/science.1061320	https://pubmed.ncbi.nlm.nih.gov/11486091/						
TkA06G477730	TkA06G477730	reference_gene_literature	At2g46830	参与生物钟和光敏色素调节的转录因子。	Arabidopsis	Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis.; PMID=12007421; DOI=10.1016/s0960-9822(02)00815-1	https://pubmed.ncbi.nlm.nih.gov/12007421/						
TkA06G477730	TkA06G477730	reference_gene_literature	At2g46830	参与生物钟和光敏色素调节的转录因子。	Arabidopsis	LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis.; PMID=12015970; DOI=10.1016/s1534-5807(02)00170-3	https://pubmed.ncbi.nlm.nih.gov/12015970/						
TkA06G477730	TkA06G477730	reference_gene_literature	At2g46830	参与生物钟和光敏色素调节的转录因子。	Arabidopsis	The circadian clock in Arabidopsis roots is a simplified slave version of the clock in shoots.; PMID=19095940; DOI=10.1126/science.1161403	https://pubmed.ncbi.nlm.nih.gov/19095940/						
TkA06G477730	TkA06G477730	reference_gene_literature	At2g46830	参与生物钟和光敏色素调节的转录因子。	Arabidopsis	CIRCADIAN CLOCK ASSOCIATED1 and LATE ELONGATED HYPOCOTYL function synergistically in the circadian clock of Arabidopsis.; PMID=19218364; DOI=10.1104/pp.108.133272	https://pubmed.ncbi.nlm.nih.gov/19218364/						
TkA06G477730	TkA06G477730	reference_gene_literature	At2g46830	参与生物钟和光敏色素调节的转录因子。	Arabidopsis	Posttranslational regulation of CIRCADIAN CLOCK ASSOCIATED1 in the circadian oscillator of Arabidopsis.; PMID=19339503; DOI=10.1104/pp.109.137414	https://pubmed.ncbi.nlm.nih.gov/19339503/						
TkA06G477730	TkA06G477730	reference_gene_literature	At2g46830	参与生物钟和光敏色素调节的转录因子。	Arabidopsis	FBH1 affects warm temperature responses in the Arabidopsis circadian clock.; PMID=25246594; DOI=10.1073/pnas.1416666111	https://pubmed.ncbi.nlm.nih.gov/25246594/						
TkA06G477730	TkA06G477730	reference_gene_literature	At2g46830	参与生物钟和光敏色素调节的转录因子。	Arabidopsis	Diurnal regulation of SDG2 and JMJ14 by circadian clock oscillators orchestrates histone modification rhythms in Arabidopsis.; PMID=31429787; DOI=10.1186/s13059-019-1777-1	https://pubmed.ncbi.nlm.nih.gov/31429787/						
TkA06G477730	TkA06G477730	reference_gene_literature	At2g46830	参与生物钟和光敏色素调节的转录因子。	Arabidopsis	Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) gene disrupts circadian rhythms and suppresses its own expression.; PMID=9657153; DOI=10.1016/s0092-8674(00)81464-6	https://pubmed.ncbi.nlm.nih.gov/9657153/						
TkA06G477730	TkA06G477730	reference_gene_function	At3g10113	可能的转录因子。	Arabidopsis	暂无已核实直接文献							
TkA06G477730	TkA06G477730	reference_gene_literature	Os08g0157600	转录因子参与分蘖生长和穗发育的调节。	Rice	The Rice Circadian Clock Regulates Tiller Growth and Panicle Development Through Strigolactone Signaling and Sugar Sensing.; PMID=32796126; DOI=10.1105/tpc.20.00289	https://pubmed.ncbi.nlm.nih.gov/32796126/						
TkA06G477730	TkA06G477730	reference_gene_literature	Os08g0157600	转录因子参与分蘖生长和穗发育的调节。	Rice	Rice CIRCADIAN CLOCK ASSOCIATED 1 transcriptionally regulates ABA signaling to confer multiple abiotic stress tolerance.; PMID=35512208; DOI=10.1093/plphys/kiac196	https://pubmed.ncbi.nlm.nih.gov/35512208/						
