query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA06G072020	TkA06G072020	function	TkA06G072020	Similar to PRIN2: Protein PLASTID REDOX INSENSITIVE 2%2C chloroplastic (Arabidopsis thaliana OX%3D3702)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	GO	GO:0006351	DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.276; coverage=14.758; evalue=4.07e-57; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	GO	GO:0009642	response to light intensity	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.276; coverage=14.758; evalue=4.07e-57; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	GO	GO:0010468	regulation of gene expression	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.276; coverage=14.758; evalue=4.07e-57; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	GO	GO:0000427	plastid-encoded plastid RNA polymerase complex	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.276; coverage=14.758; evalue=4.07e-57; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	GO	GO:0042644	chloroplast nucleoid	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.276; coverage=14.758; evalue=4.07e-57; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	GO	GO:0042646	plastid nucleoid	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.276; coverage=14.758; evalue=4.07e-57; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	GO	GO:0003677	DNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.276; coverage=14.758; evalue=4.07e-57; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	KEGG	ath:AT1G10522	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.276; coverage=14.758; evalue=4.07e-57	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	KEGG	dosa:Os09g0382400	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.819; coverage=16.158; evalue=1.91e-26	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	KEGG	zma:100278908	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.944; coverage=13.613; evalue=9.65e-28	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_025248	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA06G072020	TkA06G072020	organism_homology	Q9XIK0	sp|Q9XIK0|PRIN2_ARATH Protein PLASTID REDOX INSENSITIVE 2, chloroplastic	Arabidopsis thaliana	identity=75.9; coverage=64.368; evalue=2.11e-61; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA06G072020; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA06G072020			False
TkA06G072020	TkA06G072020	organism_homology	Q6H612	sp|Q6H612|PRIN2_ORYSJ Protein PLASTID REDOX INSENSITIVE 2, chloroplastic	Oryza sativa subsp. japonica	identity=54.1; coverage=61.494; evalue=1.81e-38; rank=3	TK1151 Swiss-Prot homology; source_gene=TkA06G072020; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA06G072020			False
TkA06G072020	TkA06G072020	reference_gene_literature	At1g10522	Involved in redox-mediated retrograde signaling to synchronize the expression of photosynthetic genes from both the nuclear and plastidic genomes, especially in excess light conditions.	Arabidopsis	The plastid redox insensitive 2 mutant of Arabidopsis is impaired in PEP activity and high light-dependent plastid redox signalling to the nucleus.; PMID=22211401; DOI=10.1111/j.1365-313x.2011.04865.x	https://pubmed.ncbi.nlm.nih.gov/22211401/						
TkA06G072020	TkA06G072020	reference_gene_literature	At1g10522	Involved in redox-mediated retrograde signaling to synchronize the expression of photosynthetic genes from both the nuclear and plastidic genomes, especially in excess light conditions.	Arabidopsis	Plastid encoded RNA polymerase activity and expression of photosynthesis genes required for embryo and seed development in Arabidopsis.; PMID=25161659; DOI=10.3389/fpls.2014.00385	https://pubmed.ncbi.nlm.nih.gov/25161659/						
TkA06G072020	TkA06G072020	reference_gene_function	Os09g0382400	Required for the activity of the plastid-encoded RNA polymerase (PEP) and full expression of genes transcribed by PEP.	Rice	No verified direct reference in this release