query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA04G110200	TkA04G110200	function	TkA04G110200	Similar to CRP1: Pentatricopeptide repeat-containing protein At5g42310%2C chloroplastic (Arabidopsis thaliana OX%3D3702)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0006397	mRNA processing	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0006417	regulation of translation	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0009658	chloroplast organization	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0010239	chloroplast mRNA processing	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0045727	positive regulation of translation	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.514; coverage=89.429; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0048255	mRNA stabilization	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.298; coverage=85.286; evalue=3.4e-67; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0005737	cytoplasm	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0009507	chloroplast	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0009534	chloroplast thylakoid	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0009570	chloroplast stroma	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0042644	chloroplast nucleoid	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0042651	thylakoid membrane	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0003727	single-stranded RNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0003729	mRNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	GO	GO:0042802	identical protein binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.298; coverage=85.286; evalue=3.4e-67; UniProt GO evidence=IPI:IntAct	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	KEGG	ath:AT5G42310	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.268; coverage=89.0; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	KEGG	dosa:Os07g0548300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.71; coverage=88.571; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	KEGG	zma:100302579	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.298; coverage=85.286; evalue=3.4e-67	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	KEGG	zma:732792	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.514; coverage=89.429; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_035760	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA04G110200	TkA04G110200	organism_homology	Q8L844	sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310, chloroplastic	Arabidopsis thaliana	identity=63.7; coverage=51.064; evalue=1.66e-92; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA04G110200; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA04G110200			False
TkA04G110200	TkA04G110200	organism_homology	Q84ZD2	sp|Q84ZD2|CRP1_ORYSJ Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic	Oryza sativa subsp. japonica	identity=33.6; coverage=51.064; evalue=5.1e-23; rank=3	TK1151 Swiss-Prot homology; source_gene=TkA04G110200; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA04G110200			False
TkA04G110200	TkA04G110200	reference_gene_literature	At5g42310	Required for chloroplast protein synthesis and accumulation of subunits of the thylakoid protein complexes.	Arabidopsis	CRP1 Protein: (dis)similarities between Arabidopsis thaliana and Zea mays.; PMID=28261232; DOI=10.3389/fpls.2017.00163	https://pubmed.ncbi.nlm.nih.gov/28261232/						
TkA04G110200	TkA04G110200	reference_gene_function	Os07g0548300	Required for the processing and translation of chloroplast mRNAs.	Rice	No verified direct reference in this release