query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA04G002940	TkA04G002940	function	TkA04G002940	Similar to At2g31400: Pentatricopeptide repeat-containing protein At2g31400%2C chloroplastic (Arabidopsis thaliana OX%3D3702)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	GO	GO:0010019	chloroplast-nucleus signaling pathway	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.495; coverage=93.909; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	GO	GO:0031930	mitochondria-nucleus signaling pathway	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.495; coverage=93.909; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	GO	GO:0042793	plastid transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.241; coverage=78.073; evalue=4.11e-72; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	GO	GO:0045893	positive regulation of DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.241; coverage=78.073; evalue=4.11e-72; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	GO	GO:0009507	chloroplast	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.495; coverage=93.909; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	GO	GO:0042644	chloroplast nucleoid	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.241; coverage=78.073; evalue=4.11e-72; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	GO	GO:0003677	DNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.495; coverage=93.909; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	GO	GO:0003729	mRNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.273; coverage=65.781; evalue=1.26e-66; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	KEGG	ath:AT1G74850	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.241; coverage=78.073; evalue=4.11e-72	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	KEGG	ath:AT2G31400	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.495; coverage=93.909; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	KEGG	ath:AT5G02860	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.273; coverage=65.781; evalue=1.26e-66	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_037103	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA04G002940	TkA04G002940	organism_homology	Q9SIC9	sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein GUN1, chloroplastic	Arabidopsis thaliana	identity=76.1; coverage=84.246; evalue=1.41e-150; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA04G002940; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA04G002940			False
TkA04G002940	TkA04G002940	organism_homology_status	Oryza sativa	当前查询蛋白的来源表暂无该物种命中；不能据此判断不存在同源。	no_species_hit			TK1151	TK1151	TkA04G002940			False
TkA04G002940	TkA04G002940	reference_gene_literature	At2g31400	Involved in nuclear gene expression via the retrograde plastid-to-nucleus signaling.	Arabidopsis	Signals from chloroplasts converge to regulate nuclear gene expression.; PMID=17395793; DOI=	https://pubmed.ncbi.nlm.nih.gov/17395793/						
TkA04G002940	TkA04G002940	reference_gene_literature	At2g31400	Involved in nuclear gene expression via the retrograde plastid-to-nucleus signaling.	Arabidopsis	Plastid signals that affect photomorphogenesis in Arabidopsis thaliana are dependent on GENOMES UNCOUPLED 1 and cryptochrome 1.; PMID=19140931; DOI=10.1111/j.1469-8137.2008.02729.x	https://pubmed.ncbi.nlm.nih.gov/19140931/						
TkA04G002940	TkA04G002940	reference_gene_literature	At2g31400	Involved in nuclear gene expression via the retrograde plastid-to-nucleus signaling.	Arabidopsis	The Arabidopsis plastid-signalling mutant gun1 (genomes uncoupled1) shows altered sensitivity to sucrose and abscisic acid and alterations in early seedling development.; PMID=20605896; DOI=10.1093/jxb/erq186	https://pubmed.ncbi.nlm.nih.gov/20605896/						
TkA04G002940	TkA04G002940	reference_gene_literature	At2g31400	Involved in nuclear gene expression via the retrograde plastid-to-nucleus signaling.	Arabidopsis	Timing the switch to phototrophic growth: a possible role of GUN1.; PMID=21673514; DOI=10.4161/psb.6.4.14900	https://pubmed.ncbi.nlm.nih.gov/21673514/