query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA03G558090	TkA03G558090	function	TkA03G558090	Similar to PCMP-E32: Putative pentatricopeptide repeat-containing protein At5g08490 (Arabidopsis thaliana OX%3D3702)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0006397	mRNA processing	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.314; coverage=77.456; evalue=2.64e-126; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0009414	response to water deprivation	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.4; coverage=78.017; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0009451	RNA modification	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.4; coverage=78.017; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0009737	response to abscisic acid	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.4; coverage=78.017; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0031425	chloroplast RNA processing	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.314; coverage=77.456; evalue=2.64e-126; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0080156	mitochondrial mRNA modification	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.4; coverage=78.017; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0005739	mitochondrion	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.4; coverage=78.017; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0009507	chloroplast	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.314; coverage=77.456; evalue=2.64e-126; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0003723	RNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.4; coverage=78.017; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0003729	mRNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.314; coverage=77.456; evalue=2.64e-126; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	GO	GO:0008270	zinc ion binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.314; coverage=77.456; evalue=2.64e-126; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	KEGG	ath:AT2G40720	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.254; coverage=78.017; evalue=1.55e-120	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	KEGG	ath:AT3G63370	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.314; coverage=77.456; evalue=2.64e-126	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	KEGG	ath:AT5G08490	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=49.4; coverage=78.017; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_010954	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G558090	TkA03G558090	organism_homology	A9LNK9	sp|A9LNK9|CPSF_ARATH 30-kDa cleavage and polyadenylation specificity factor 30	Arabidopsis thaliana	identity=65.4; coverage=82.805; evalue=4.24e-79; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA03G558090; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA03G558090			False
TkA03G558090	TkA03G558090	organism_homology	Q0DA50	sp|Q0DA50|C3H45_ORYSJ Zinc finger CCCH domain-containing protein 45	Oryza sativa subsp. japonica	identity=65.7; coverage=44.796; evalue=6.12e-45; rank=2	TK1151 Swiss-Prot homology; source_gene=TkA03G558090; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA03G558090			False
TkA03G558090	TkA03G558090	reference_gene_literature	At1g30460	Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation.	Arabidopsis	Calmodulin interacts with and regulates the RNA-binding activity of an Arabidopsis polyadenylation factor subunit.; PMID=16500995; DOI=10.1104/pp.105.070672	https://pubmed.ncbi.nlm.nih.gov/16500995/						
TkA03G558090	TkA03G558090	reference_gene_literature	At1g30460	Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation.	Arabidopsis	A novel endonuclease activity associated with the Arabidopsis ortholog of the 30-kDa subunit of cleavage and polyadenylation specificity factor.; PMID=17576667; DOI=10.1093/nar/gkm457	https://pubmed.ncbi.nlm.nih.gov/17576667/						
TkA03G558090	TkA03G558090	reference_gene_literature	At1g30460	Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation.	Arabidopsis	A polyadenylation factor subunit implicated in regulating oxidative signaling in Arabidopsis thaliana.; PMID=18545667; DOI=10.1371/journal.pone.0002410	https://pubmed.ncbi.nlm.nih.gov/18545667/						
TkA03G558090	TkA03G558090	reference_gene_literature	At1g30460	Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation.	Arabidopsis	The Arabidopsis ortholog of the 77 kDa subunit of the cleavage stimulatory factor (AtCstF-77) involved in mRNA polyadenylation is an RNA-binding protein.; PMID=20214900; DOI=10.1016/j.febslet.2010.03.007	https://pubmed.ncbi.nlm.nih.gov/20214900/						
TkA03G558090	TkA03G558090	reference_gene_literature	At1g30460	Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation.	Arabidopsis	Genome-wide control of polyadenylation site choice by CPSF30 in Arabidopsis.; PMID=23136375; DOI=10.1105/tpc.112.096107	https://pubmed.ncbi.nlm.nih.gov/23136375/						
TkA03G558090	TkA03G558090	reference_gene_literature	At1g30460	Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation.	Arabidopsis	The Polyadenylation Factor Subunit CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR30: A Key Factor of Programmed Cell Death and a Regulator of Immunity in Arabidopsis.; PMID=24706550; DOI=10.1104/pp.114.236083	https://pubmed.ncbi.nlm.nih.gov/24706550/						
TkA03G558090	TkA03G558090	reference_gene_function	Os06g0677700	Zinc finger CCCH domain-containing protein 45.	Rice	No verified direct reference in this release