query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation TkA03G340640 TkA03G340640 function TkA03G340640 Similar to J2: MADS-box protein J2 (Solanum lycopersicum OX%3D4081) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.134; coverage=84.038; evalue=3.64e-39; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0006357 regulation of transcription by RNA polymerase II biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.134; coverage=84.038; evalue=3.64e-39; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0009631 cold acclimation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.767; coverage=80.751; evalue=8.66e-37; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0010048 vernalization response biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.767; coverage=80.751; evalue=8.66e-37; UniProt GO evidence=IEP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0010220 positive regulation of vernalization response biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.767; coverage=80.751; evalue=8.66e-37; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0010221 negative regulation of vernalization response biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.767; coverage=80.751; evalue=8.66e-37; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0010582 floral meristem determinacy biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.286; coverage=82.16; evalue=1.53e-38; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0045944 positive regulation of transcription by RNA polymerase II biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.134; coverage=84.038; evalue=3.64e-39; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0048440 carpel development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.134; coverage=84.038; evalue=3.64e-39; UniProt GO evidence=IEA:UniProtKB-ARBA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:2000028 regulation of photoperiodism, flowering biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.767; coverage=80.751; evalue=8.66e-37; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.134; coverage=84.038; evalue=3.64e-39; UniProt GO evidence=IEA:UniProtKB-SubCell UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.134; coverage=84.038; evalue=3.64e-39; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.134; coverage=84.038; evalue=3.64e-39; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 GO GO:0046983 protein dimerization activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.134; coverage=84.038; evalue=3.64e-39; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 KEGG bdi:100842079 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.767; coverage=80.751; evalue=8.66e-37 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 KEGG sly:101263981 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.134; coverage=84.038; evalue=3.64e-39 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 KEGG vvi:100232867 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.271; coverage=90.141; evalue=2.43e-38 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 KEGG vvi:100232952 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.286; coverage=82.16; evalue=1.53e-38 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008732 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G340640 TkA03G340640 organism_homology Q683D7 sp|Q683D7|MAF5_ARATH Protein MADS AFFECTING FLOWERING 5 Arabidopsis thaliana identity=35.1; coverage=58.73; evalue=6.73e-07; rank=1 TK1151 Swiss-Prot homology; source_gene=TkA03G340640; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA03G340640 False TkA03G340640 TkA03G340640 organism_homology Q10CQ1 sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 Oryza sativa subsp. japonica identity=42.4; coverage=89.894; evalue=1.4e-38; rank=4 TK1151 Swiss-Prot homology; source_gene=TkA03G340640; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA03G340640 False TkA03G340640 TkA03G340640 reference_gene_literature At5g65080 Transcription factor involved in the negative regulation of flowering time in short days, probably through the photoperiodic and vernalization pathways. Arabidopsis Analysis of the Arabidopsis MADS AFFECTING FLOWERING gene family: MAF2 prevents vernalization by short periods of cold.; PMID=12724541; DOI=10.1105/tpc.009506 https://pubmed.ncbi.nlm.nih.gov/12724541/ TkA03G340640 TkA03G340640 reference_gene_literature At5g65080 Transcription factor involved in the negative regulation of flowering time in short days, probably through the photoperiodic and vernalization pathways. Arabidopsis The E2 ubiquitin-conjugating enzymes, AtUBC1 and AtUBC2, play redundant roles and are involved in activation of FLC expression and repression of flowering in Arabidopsis thaliana.; PMID=18798874; DOI=10.1111/j.1365-313x.2008.03684.x https://pubmed.ncbi.nlm.nih.gov/18798874/ TkA03G340640 TkA03G340640 reference_gene_literature At5g65080 Transcription factor involved in the negative regulation of flowering time in short days, probably through the photoperiodic and vernalization pathways. Arabidopsis The Plant Homeo Domain finger protein, VIN3-LIKE 2, is necessary for photoperiod-mediated epigenetic regulation of the floral repressor, MAF5.; PMID=20837520; DOI=10.1073/pnas.1010834107 https://pubmed.ncbi.nlm.nih.gov/20837520/ TkA03G340640 TkA03G340640 reference_gene_literature At5g65080 Transcription factor involved in the negative regulation of flowering time in short days, probably through the photoperiodic and vernalization pathways. Arabidopsis Role of VIN3-LIKE 2 in facultative photoperiodic flowering response in Arabidopsis.; PMID=21150261; DOI=10.4161/psb.5.12.14035 https://pubmed.ncbi.nlm.nih.gov/21150261/ TkA03G340640 TkA03G340640 reference_gene_literature At5g65080 Transcription factor involved in the negative regulation of flowering time in short days, probably through the photoperiodic and vernalization pathways. Arabidopsis AGAMOUS-LIKE 6 is a floral promoter that negatively regulates the FLC/MAF clade genes and positively regulates FT in Arabidopsis.; PMID=21175890; DOI=10.1111/j.1365-313x.2010.04402.x https://pubmed.ncbi.nlm.nih.gov/21175890/ TkA03G340640 TkA03G340640 reference_gene_literature At5g65080 Transcription factor involved in the negative regulation of flowering time in short days, probably through the photoperiodic and vernalization pathways. Arabidopsis HISTONE DEACETYLASE6 interacts with FLOWERING LOCUS D and regulates flowering in Arabidopsis.; PMID=21398257; DOI=10.1104/pp.111.174417 https://pubmed.ncbi.nlm.nih.gov/21398257/ TkA03G340640 TkA03G340640 reference_gene_literature At5g65080 Transcription factor involved in the negative regulation of flowering time in short days, probably through the photoperiodic and vernalization pathways. Arabidopsis Arabidopsis trithorax-related3/SET domain GROUP2 is required for the winter-annual habit of Arabidopsis thaliana.; PMID=22378382; DOI=10.1093/pcp/pcs021 https://pubmed.ncbi.nlm.nih.gov/22378382/ TkA03G340640 TkA03G340640 reference_gene_function At5g65060 Probable transcription factor involved in the negative regulation of flowering time, probably through the photoperiodic and vernalization pathways; more efficient in cv. Arabidopsis No verified direct reference in this release TkA03G340640 TkA03G340640 reference_gene_function Os03g0752800 Probable transcription factor. Rice No verified direct reference in this release TkA03G340640 TkA03G340640 reference_gene_function P0C5B1 Probable transcription factor. Rice No verified direct reference in this release