query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation TkA03G329140 TkA03G329140 function TkA03G329140 Similar to LDL3: Lysine-specific histone demethylase 1 homolog 3 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0006325 chromatin organization biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.911; coverage=27.635; evalue=2.02e-93; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.532; coverage=84.13; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0009627 systemic acquired resistance biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.481; coverage=28.002; evalue=5.33e-93; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0010228 vegetative to reproductive phase transition of meristem biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.481; coverage=28.002; evalue=5.33e-93; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0045892 negative regulation of DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.911; coverage=27.635; evalue=2.02e-93; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0046208 spermine catabolic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.911; coverage=27.635; evalue=2.02e-93; UniProt GO evidence=IEA:UniProtKB-ARBA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0048364 root development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.871; coverage=28.431; evalue=9.2e-91; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0048510 regulation of timing of transition from vegetative to reproductive phase biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.481; coverage=28.002; evalue=5.33e-93; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:1903602 thermospermine catabolic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.911; coverage=27.635; evalue=2.02e-93; UniProt GO evidence=IEA:UniProtKB-ARBA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:1904629 response to diterpene biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.481; coverage=28.002; evalue=5.33e-93; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:2000028 regulation of photoperiodism, flowering biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.481; coverage=28.002; evalue=5.33e-93; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.911; coverage=27.635; evalue=2.02e-93; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.871; coverage=28.431; evalue=9.2e-91; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0005739 mitochondrion cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.532; coverage=84.13; evalue=0.0; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0009507 chloroplast cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.481; coverage=28.002; evalue=5.33e-93; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0016491 oxidoreductase activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.532; coverage=84.13; evalue=0.0; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.532; coverage=84.13; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0032452 histone demethylase activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.481; coverage=28.002; evalue=5.33e-93; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0042800 histone H3K4 methyltransferase activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.871; coverage=28.431; evalue=9.2e-91; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0050660 flavin adenine dinucleotide binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.911; coverage=27.635; evalue=2.02e-93; UniProt GO evidence=IEA:UniProtKB-ARBA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0052901 spermine oxidase activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.911; coverage=27.635; evalue=2.02e-93; UniProt GO evidence=IEA:UniProtKB-ARBA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 GO GO:0141052 histone H3 demethylase activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.532; coverage=84.13; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 KEGG ath:AT1G62830 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.871; coverage=28.431; evalue=9.2e-91 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 KEGG ath:AT3G10390 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.481; coverage=28.002; evalue=5.33e-93 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 KEGG ath:AT4G16310 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.532; coverage=84.13; evalue=0.0 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 KEGG dosa:Os02g0755200 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.911; coverage=27.635; evalue=2.02e-93 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 KEGG dosa:Os08g0143400 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=39.002; coverage=27.022; evalue=9.62e-91 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_008822 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict True TkA03G329140 TkA03G329140 organism_homology F4JLS1 sp|F4JLS1|LDL3_ARATH Lysine-specific histone demethylase 1 homolog 3 Arabidopsis thaliana identity=57.2; coverage=98.609; evalue=1.83e-218; rank=1 TK1151 Swiss-Prot homology; source_gene=TkA03G329140; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA03G329140 False TkA03G329140 TkA03G329140 organism_homology Q6Z690 sp|Q6Z690|LDL1_ORYSJ Lysine-specific histone demethylase 1 homolog 1 Oryza sativa subsp. japonica identity=44.9; coverage=19.32; evalue=2.38e-27; rank=2 TK1151 Swiss-Prot homology; source_gene=TkA03G329140; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA03G329140 False TkA03G329140 TkA03G329140 reference_gene_function F4JLS1 Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin. Arabidopsis No verified direct reference in this release TkA03G329140 TkA03G329140 reference_gene_literature At1g62830 Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA. Arabidopsis Arabidopsis relatives of the human lysine-specific Demethylase1 repress the expression of FWA and FLOWERING LOCUS C and thus promote the floral transition.; PMID=17921315; DOI=10.1105/tpc.107.052373 https://pubmed.ncbi.nlm.nih.gov/17921315/ TkA03G329140 TkA03G329140 reference_gene_literature At1g62830 Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA. Arabidopsis Involvement of KDM1C histone demethylase-OTLD1 otubain-like histone deubiquitinase complexes in plant gene repression.; PMID=21690391; DOI=10.1073/pnas.1014030108 https://pubmed.ncbi.nlm.nih.gov/21690391/ TkA03G329140 TkA03G329140 reference_gene_literature At1g62830 Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA. Arabidopsis Arabidopsis histone demethylases LDL1 and LDL2 control primary seed dormancy by regulating DELAY OF GERMINATION 1 and ABA signaling-related genes.; PMID=25852712; DOI=10.3389/fpls.2015.00159 https://pubmed.ncbi.nlm.nih.gov/25852712/ TkA03G329140 TkA03G329140 reference_gene_literature At3g13682 Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA. Arabidopsis Arabidopsis relatives of the human lysine-specific Demethylase1 repress the expression of FWA and FLOWERING LOCUS C and thus promote the floral transition.; PMID=17921315; DOI=10.1105/tpc.107.052373 https://pubmed.ncbi.nlm.nih.gov/17921315/ TkA03G329140 TkA03G329140 reference_gene_literature At3g13682 Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA. Arabidopsis Arabidopsis histone demethylases LDL1 and LDL2 control primary seed dormancy by regulating DELAY OF GERMINATION 1 and ABA signaling-related genes.; PMID=25852712; DOI=10.3389/fpls.2015.00159 https://pubmed.ncbi.nlm.nih.gov/25852712/ TkA03G329140 TkA03G329140 reference_gene_function Os02g0755200 Probable histone demethylase. Rice No verified direct reference in this release TkA03G329140 TkA03G329140 reference_gene_function Os08g0143400 Probable histone demethylase. Rice No verified direct reference in this release