query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA03G277910	TkA03G277910	function	TkA03G277910	Similar to Os08g0127700: Pre-mRNA-splicing factor SLU7 (Oryza sativa subsp. japonica OX%3D39947)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0000398	mRNA splicing, via spliceosome	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=81.544; coverage=93.816; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0008284	positive regulation of cell population proliferation	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=80.189; coverage=93.64; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0008380	RNA splicing	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=80.189; coverage=93.64; evalue=0.0; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0009416	response to light stimulus	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=76.56; coverage=93.463; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0009637	response to blue light	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=76.56; coverage=93.463; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0010100	negative regulation of photomorphogenesis	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=76.56; coverage=93.463; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0010114	response to red light	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=76.56; coverage=93.463; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0010218	response to far red light	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=76.56; coverage=93.463; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0010230	alternative respiration	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=76.56; coverage=93.463; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0045292	mRNA cis splicing, via spliceosome	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.544; coverage=93.816; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:1900140	regulation of seedling development	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=76.56; coverage=93.463; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0005634	nucleus	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=80.189; coverage=93.64; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0005681	spliceosomal complex	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.544; coverage=93.816; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0005737	cytoplasm	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.365; coverage=97.35; evalue=2.23e-154; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0016607	nuclear speck	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.365; coverage=97.35; evalue=2.23e-154; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0000386	second spliceosomal transesterification activity	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.544; coverage=93.816; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0003727	single-stranded RNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=80.189; coverage=93.64; evalue=0.0; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0008270	zinc ion binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.544; coverage=93.816; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	GO	GO:0030628	pre-mRNA 3'-splice site binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.544; coverage=93.816; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	KEGG	ath:AT1G65660	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=80.189; coverage=93.64; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	KEGG	ath:AT4G37120	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=76.56; coverage=93.463; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	KEGG	dosa:Os08g0127700	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.544; coverage=93.816; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	KEGG	gga:416157	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.365; coverage=97.35; evalue=2.23e-154	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_008159	GCA_047496595.1_OSU_TarKok_2.0	annotation_conflict	True
TkA03G277910	TkA03G277910	organism_homology	Q9SHY8	sp|Q9SHY8|SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A	Arabidopsis thaliana	identity=76.3; coverage=99.813; evalue=1.91e-297; rank=3	TK1151 Swiss-Prot homology; source_gene=TkA03G277910; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA03G277910			False
TkA03G277910	TkA03G277910	organism_homology	A2YQU8	sp|A2YQU8|SLU7_ORYSI Pre-mRNA-splicing factor SLU7	Oryza sativa subsp. indica	identity=79.5; coverage=100.0; evalue=7.57e-316; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA03G277910; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA03G277910			False
TkA03G277910	TkA03G277910	reference_gene_literature	At1g65660	Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron (By similarity).	Arabidopsis	The recessive epigenetic swellmap mutation affects the expression of two step II splicing factors required for the transcription of the cell proliferation gene STRUWWELPETER and for the timing of cell cycle arrest in the Arabidopsis leaf.; PMID=15937226; DOI=10.1105/tpc.105.032771	https://pubmed.ncbi.nlm.nih.gov/15937226/						
TkA03G277910	TkA03G277910	reference_gene_literature	At4g37120	Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron (By similarity).	Arabidopsis	The recessive epigenetic swellmap mutation affects the expression of two step II splicing factors required for the transcription of the cell proliferation gene STRUWWELPETER and for the timing of cell cycle arrest in the Arabidopsis leaf.; PMID=15937226; DOI=10.1105/tpc.105.032771	https://pubmed.ncbi.nlm.nih.gov/15937226/						
TkA03G277910	TkA03G277910	reference_gene_literature	At4g37120	Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron (By similarity).	Arabidopsis	SWELLMAP 2, a phyB-Interacting Splicing Factor, Negatively Regulates Seedling Photomorphogenesis in  Arabidopsis .; PMID=35222493; DOI=10.3389/fpls.2022.836519	https://pubmed.ncbi.nlm.nih.gov/35222493/						
TkA03G277910	TkA03G277910	reference_gene_function	A2YQU8	Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron.	Rice	No verified direct reference in this release							
TkA03G277910	TkA03G277910	reference_gene_function	Os08g0127700	Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron.	Rice	No verified direct reference in this release