query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation TkA02G546120 TkA02G546120 function TkA02G546120 Similar to CBP20: Nuclear cap-binding protein subunit 2 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0000380 alternative mRNA splicing, via spliceosome biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IMP:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0000398 mRNA splicing, via spliceosome biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0000956 nuclear-transcribed mRNA catabolic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=NAS:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0002191 cap-dependent translational initiation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=NAS:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0006406 mRNA export from nucleus biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=NAS:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0006408 snRNA export from nucleus biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0006446 regulation of translational initiation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0008334 histone mRNA metabolic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IMP:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0008380 RNA splicing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0016070 RNA metabolic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=TAS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0016071 mRNA metabolic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0031047 regulatory ncRNA-mediated gene silencing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.415; coverage=79.355; evalue=2.4e-94; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0031053 primary miRNA processing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IMP:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0031124 mRNA 3'-end processing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=NAS:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0031442 positive regulation of mRNA 3'-end processing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0032968 positive regulation of transcription elongation by RNA polymerase II biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=NAS:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=NAS:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0035195 miRNA-mediated post-transcriptional gene silencing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=NAS:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0042789 mRNA transcription by RNA polymerase II biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=NAS:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0045292 mRNA cis splicing, via spliceosome biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0046833 positive regulation of RNA export from nucleus biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0051028 mRNA transport biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0051607 defense response to virus biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IDA:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IDA:ComplexPortal UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0005654 nucleoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IEA:UniProtKB-SubCell UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0005829 cytosol cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IDA:HPA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0005846 nuclear cap binding complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0034518 RNA cap binding complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IMP:CAFA UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0000339 RNA cap binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0000340 RNA 7-methylguanosine cap binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0003677 DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=EXP:DisProt UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0003723 RNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=HDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0003729 mRNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 GO GO:0017069 snRNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 KEGG ath:AT5G44200 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.008; coverage=78.065; evalue=5.85e-102 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 KEGG bta:510872 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.584; coverage=44.194; evalue=2.69e-53 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 KEGG dosa:Os02g0612300 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=63.415; coverage=79.355; evalue=2.4e-94 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 KEGG hsa:22916 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.584; coverage=44.194; evalue=2.69e-53 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 KEGG isc:8026041 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=55.405; coverage=47.742; evalue=3.53e-53 UniProtKB/Swiss-Prot DAT 2026 current_release TK1151 OH1004 LXL04_012674 GCA_047496595.1_OSU_TarKok_2.0 probable_1to1 True TkA02G546120 TkA02G546120 organism_homology Q9XFD1 sp|Q9XFD1|NCBP2_ARATH Nuclear cap-binding protein subunit 2 Arabidopsis thaliana identity=80.9; coverage=86.441; evalue=8.6e-110; rank=1 TK1151 Swiss-Prot homology; source_gene=TkA02G546120; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA02G546120 False TkA02G546120 TkA02G546120 organism_homology Q84L14 sp|Q84L14|NCBP2_ORYSJ Nuclear cap-binding protein subunit 2 Oryza sativa subsp. japonica identity=65.4; coverage=85.424; evalue=1.8e-103; rank=2 TK1151 Swiss-Prot homology; source_gene=TkA02G546120; source_db=UniProt Swiss-Prot local database (DIAMOND) TK1151 TK1151 TkA02G546120 False TkA02G546120 TkA02G546120 reference_gene_literature At5g44200 Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs). Arabidopsis Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana.; PMID=18550839; DOI=10.1073/pnas.0802493105 https://pubmed.ncbi.nlm.nih.gov/18550839/ TkA02G546120 TkA02G546120 reference_gene_literature At5g44200 Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs). Arabidopsis Two cap-binding proteins CBP20 and CBP80 are involved in processing primary MicroRNAs.; PMID=18829588; DOI=10.1093/pcp/pcn146 https://pubmed.ncbi.nlm.nih.gov/18829588/ TkA02G546120 TkA02G546120 reference_gene_literature At5g44200 Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs). Arabidopsis FRIGIDA delays flowering in Arabidopsis via a cotranscriptional mechanism involving direct interaction with the nuclear cap-binding complex.; PMID=19429606; DOI=10.1104/pp.109.137448 https://pubmed.ncbi.nlm.nih.gov/19429606/ TkA02G546120 TkA02G546120 reference_gene_function Os02g0612300 Component of the cap-binding complex (CBC), which binds co-transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs). Rice No verified direct reference in this release