query	gene_id	record_type	id	name	namespace_or_position	evidence	source	query_reference	annotation_reference	annotation_gene_id	annotation_assembly	mapping_category	mapped_annotation
TkA01G552560	TkA01G552560	function	TkA01G552560	Similar to PIF3: Transcription factor PIF3 (Arabidopsis thaliana OX%3D3702)		GFF-derived	GCA_047496595.1_OSU_TarKok_2.0	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0006351	DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0006355	regulation of DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0007165	signal transduction	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009408	response to heat	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009409	response to cold	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009585	red, far-red light phototransduction	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009639	response to red or far red light	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009641	shade avoidance	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.676; coverage=36.164; evalue=1.81e-36; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009704	de-etiolation	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009723	response to ethylene	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009733	response to auxin	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009737	response to abscisic acid	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009740	gibberellic acid mediated signaling pathway	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009742	brassinosteroid mediated signaling pathway	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=62.698; coverage=18.448; evalue=7.89e-36; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0009826	unidimensional cell growth	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0010017	red or far-red light signaling pathway	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0031539	positive regulation of anthocyanin metabolic process	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0042548	regulation of photosynthesis, light reaction	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0045893	positive regulation of DNA-templated transcription	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.841; coverage=34.993; evalue=4.42e-36; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0080006	internode patterning	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.841; coverage=34.993; evalue=4.42e-36; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0080113	regulation of seed growth	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=62.698; coverage=18.448; evalue=7.89e-36; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0090229	negative regulation of red or far-red light signaling pathway	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.455; coverage=73.939; evalue=6.3e-52; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:1902074	response to salt	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:1905421	regulation of plant organ morphogenesis	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:1990785	response to water-immersion restraint stress	biological_process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0005634	nucleus	cellular_component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0000976	transcription cis-regulatory region binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0003677	DNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0003700	DNA-binding transcription factor activity	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0042802	identical protein binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IPI:IntAct	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0043565	sequence-specific DNA binding	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	GO	GO:0046983	protein dimerization activity	molecular_function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	KEGG	ath:AT1G09530	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=39.871; coverage=67.936; evalue=7.71e-67	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	KEGG	ath:AT2G46970	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.676; coverage=36.164; evalue=1.81e-36	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	KEGG	dosa:Os01g0286100	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.455; coverage=73.939; evalue=6.3e-52	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	KEGG	dosa:Os03g0782500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=41.841; coverage=34.993; evalue=4.42e-36	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	KEGG	dosa:Os05g0139100	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=62.698; coverage=18.448; evalue=7.89e-36	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	KEGG	osa:4327916	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.455; coverage=73.939; evalue=6.3e-52	UniProtKB/Swiss-Prot DAT 2026 current_release	TK1151	OH1004	LXL04_001236	GCA_047496595.1_OSU_TarKok_2.0	strict_1to1	True
TkA01G552560	TkA01G552560	organism_homology	O80536	sp|O80536|PIF3_ARATH Transcription factor PIF3	Arabidopsis thaliana	identity=39.4; coverage=72.064; evalue=8.07e-57; rank=1	TK1151 Swiss-Prot homology; source_gene=TkA01G552560; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA01G552560			False
TkA01G552560	TkA01G552560	organism_homology	Q0JNI9	sp|Q0JNI9|PIL15_ORYSJ Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15	Oryza sativa subsp. japonica	identity=46.1; coverage=45.907; evalue=1.99e-39; rank=2	TK1151 Swiss-Prot homology; source_gene=TkA01G552560; source_db=UniProt Swiss-Prot local database (DIAMOND)	TK1151	TK1151	TkA01G552560			False
TkA01G552560	TkA01G552560	reference_gene_literature	At1g09530	在光敏色素信号通路中起作用的转录因子。	Arabidopsis	PHYTOCHROME INTERACTING FACTOR3 associates with the histone deacetylase HDA15 in repression of chlorophyll biosynthesis and photosynthesis in etiolated Arabidopsis seedlings.; PMID=23548744; DOI=10.1105/tpc.113.109710	https://pubmed.ncbi.nlm.nih.gov/23548744/						
TkA01G552560	TkA01G552560	reference_gene_literature	At1g09530	在光敏色素信号通路中起作用的转录因子。	Arabidopsis	Coordinated Regulation of Hypocotyl Cell Elongation by Light and Ethylene through a Microtubule Destabilizing Protein.; PMID=29167353; DOI=10.1104/pp.17.01109	https://pubmed.ncbi.nlm.nih.gov/29167353/						
TkA01G552560	TkA01G552560	reference_gene_literature	At1g09530	在光敏色素信号通路中起作用的转录因子。	Arabidopsis	Submergence stress-induced hypocotyl elongation through ethylene signaling-mediated regulation of cortical microtubules in Arabidopsis.; PMID=31638649; DOI=10.1093/jxb/erz453	https://pubmed.ncbi.nlm.nih.gov/31638649/						
TkA01G552560	TkA01G552560	reference_gene_literature	At1g09530	在光敏色素信号通路中起作用的转录因子。	Arabidopsis	PHYTOCHROME INTERACTING FACTOR8 Inhibits Phytochrome A-Mediated Far-Red Light Responses in Arabidopsis.; PMID=31732705; DOI=10.1105/tpc.19.00515	https://pubmed.ncbi.nlm.nih.gov/31732705/						
TkA01G552560	TkA01G552560	reference_gene_literature	At2g20180	转录激活剂。	Arabidopsis	SOMNUS, a CCCH-type zinc finger protein in Arabidopsis, negatively regulates light-dependent seed germination downstream of PIL5.; PMID=18487351; DOI=10.1105/tpc.108.058859	https://pubmed.ncbi.nlm.nih.gov/18487351/						
TkA01G552560	TkA01G552560	reference_gene_literature	Os01g0286100	转录因子，可能作为phyB依赖光信号转导的负调控因子。	Rice	Characterization of a set of phytochrome-interacting factor-like bHLH proteins in Oryza sativa.; PMID=17485859; DOI=10.1271/bbb.60643	https://pubmed.ncbi.nlm.nih.gov/17485859/						
TkA01G552560	TkA01G552560	reference_gene_function	Os05g0139100	非典型bHLH转录因子，作为谷粒大小的负调控因子。	Rice	暂无已核实直接文献							
TkA01G552560	TkA01G552560	reference_gene_literature	Os03g0782500	转录因子，可能作为phyB依赖光信号转导的负调控因子。	Rice	Characterization of a set of phytochrome-interacting factor-like bHLH proteins in Oryza sativa.; PMID=17485859; DOI=10.1271/bbb.60643	https://pubmed.ncbi.nlm.nih.gov/17485859/						
TkA01G552560	TkA01G552560	reference_gene_literature	Os03g0782500	转录因子，可能作为phyB依赖光信号转导的负调控因子。	Rice	Rice phytochrome-interacting factor-like protein OsPIL1 functions as a key regulator of internode elongation and induces a morphological response to drought stress.; PMID=22984180; DOI=10.1073/pnas.1207324109	https://pubmed.ncbi.nlm.nih.gov/22984180/