query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_035457 LXL04_035457 function LXL04_035457 Similar to HDA19: Histone deacetylase 19 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0009294 DNA-mediated transformation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0009861 jasmonic acid and ethylene-dependent systemic resistance biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0040029 epigenetic regulation of gene expression biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0042742 defense response to bacterium biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0045892 negative regulation of DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:1901001 negative regulation of response to salt stress biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:1902459 positive regulation of stem cell population maintenance biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:2000026 regulation of multicellular organismal development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0000118 histone deacetylase complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IPI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0070822 Sin3-type complex cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0004407 histone deacetylase activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0008270 zinc ion binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 GO GO:0141221 histone deacetylase activity, hydrolytic mechanism molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 KEGG ath:AT4G38130 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.595; coverage=98.788; evalue=0.0 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 KEGG dosa:Os02g0214900 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.885; coverage=91.313; evalue=0.0 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 KEGG dosa:Os02g0215200 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.327; coverage=91.313; evalue=0.0 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 KEGG dosa:Os06g0583400 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.165; coverage=102.626; evalue=0.0 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 KEGG osa:4328720 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.327; coverage=91.313; evalue=0.0 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 KEGG osa:4341387 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.165; coverage=102.626; evalue=0.0 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_035457 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_035457 LXL04_035457 organism_homology O22446 Histone deacetylase 19 OS=Arabidopsis thaliana OX=3702 GN=HDA19 PE=1 SV=2 Arabidopsis thaliana identity=81.595; coverage=98.384; evalue=0.0; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_035457; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_035457 False LXL04_035457 LXL04_035457 organism_homology Q7Y0Y8 Histone deacetylase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDAC1 PE=1 SV=1 Oryza sativa subsp. japonica identity=77.165; coverage=98.384; evalue=0.0; rank=2 OH-1004 Swiss-Prot homology; source_gene=LXL04_035457; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_035457 False LXL04_035457 LXL04_035457 reference_gene_literature At4g38130 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Arabidopsis Functional analysis of a RPD3 histone deacetylase homologue in Arabidopsis thaliana.; PMID=11117260; DOI=10.1023/a:1006498413543 https://pubmed.ncbi.nlm.nih.gov/11117260/ LXL04_035457 LXL04_035457 reference_gene_literature At4g38130 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Arabidopsis HISTONE DEACETYLASE19 is involved in jasmonic acid and ethylene signaling of pathogen response in Arabidopsis.; PMID=15749761; DOI=10.1105/tpc.104.028514 https://pubmed.ncbi.nlm.nih.gov/15749761/ LXL04_035457 LXL04_035457 reference_gene_literature At4g38130 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Arabidopsis Arabidopsis thaliana histone deacetylase 1 (AtHD1) is localized in euchromatic regions and demonstrates histone deacetylase activity in vitro.; PMID=16699543; DOI=10.1038/sj.cr.7310059 https://pubmed.ncbi.nlm.nih.gov/16699543/ LXL04_035457 LXL04_035457 reference_gene_literature At4g38130 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Arabidopsis APETALA2 negatively regulates multiple floral organ identity genes in Arabidopsis by recruiting the co-repressor TOPLESS and the histone deacetylase HDA19.; PMID=23034631; DOI=10.1242/dev.085407 https://pubmed.ncbi.nlm.nih.gov/23034631/ LXL04_035457 LXL04_035457 reference_gene_literature At4g38130 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Arabidopsis The Distinct Roles of Class I and II RPD3-Like Histone Deacetylases in Salinity Stress Response.; PMID=29018096; DOI=10.1104/pp.17.01332 https://pubmed.ncbi.nlm.nih.gov/29018096/ LXL04_035457 LXL04_035457 reference_gene_literature Os06g0583400 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Rice Structure and expression of the rice class-I type histone deacetylase genes OsHDAC1-3: OsHDAC1 overexpression in transgenic plants leads to increased growth rate and altered architecture.; PMID=12581311; DOI=10.1046/j.1365-313x.2003.01650.x https://pubmed.ncbi.nlm.nih.gov/12581311/ LXL04_035457 LXL04_035457 reference_gene_literature Os06g0583400 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Rice The histone deacetylase OsHDAC1 epigenetically regulates the OsNAC6 gene that controls seedling root growth in rice.; PMID=19453457; DOI=10.1111/j.1365-313x.2009.03908.x https://pubmed.ncbi.nlm.nih.gov/19453457/ LXL04_035457 LXL04_035457 reference_gene_literature Os06g0583400 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Rice MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice.; PMID=27468891; DOI=10.1105/tpc.16.00171 https://pubmed.ncbi.nlm.nih.gov/27468891/ LXL04_035457 LXL04_035457 reference_gene_function Os02g0214900 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Rice No verified direct reference in this release LXL04_035457 LXL04_035457 reference_gene_function Os02g0215200 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Rice No verified direct reference in this release