query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_017812 LXL04_017812 function LXL04_017812 Similar to FDM3: Factor of DNA methylation 3 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 GO GO:0010569 regulation of double-strand break repair via homologous recombination biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.532; coverage=74.15; evalue=1.29e-15; UniProt GO evidence=IEP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 GO GO:0032259 methylation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.697; coverage=74.15; evalue=3.81e-13; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 GO GO:0046686 response to cadmium ion biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.532; coverage=74.15; evalue=1.29e-15; UniProt GO evidence=IEP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 GO GO:0080188 gene silencing by siRNA-directed DNA methylation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.0; coverage=74.83; evalue=8.05e-18; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.0; coverage=74.83; evalue=8.05e-18; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.532; coverage=74.15; evalue=1.29e-15; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 GO GO:0003723 RNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.532; coverage=74.15; evalue=1.29e-15; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 GO GO:0008168 methyltransferase activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.697; coverage=74.15; evalue=3.81e-13; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 KEGG ath:AT1G13790 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=36.697; coverage=74.15; evalue=3.81e-13 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 KEGG ath:AT3G12550 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.0; coverage=74.83; evalue=8.05e-18 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 KEGG ath:AT3G48670 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.532; coverage=74.15; evalue=1.29e-15 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_017812 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_017812 LXL04_017812 organism_homology Q9LHB1 Factor of DNA methylation 3 OS=Arabidopsis thaliana OX=3702 GN=FDM3 PE=4 SV=1 Arabidopsis thaliana identity=40.0; coverage=68.707; evalue=8.05e-18; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_017812; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_017812 False LXL04_017812 LXL04_017812 organism_homology_status Oryza sativa 当前查询蛋白的来源表暂无该物种命中；不能据此判断不存在同源。 no_species_hit OH1004 OH1004 LXL04_017812 False LXL04_017812 LXL04_017812 reference_gene_literature At3g12550 Acts in association with FDM4 and FDM5 for RNA-directed DNA methylation (RdDM). Arabidopsis A subgroup of SGS3-like proteins act redundantly in RNA-directed DNA methylation.; PMID=22302148; DOI=10.1093/nar/gks034 https://pubmed.ncbi.nlm.nih.gov/22302148/ LXL04_017812 LXL04_017812 reference_gene_literature At3g48670 Forms a complex with FDM1/IDNL1 and FDM2/IDNL2 that is required for RNA-directed DNA methylation (RdDM) and that functions at a downstream step of the RdDM pathway and downstream of small interfering RNA (siRNA) formation. Arabidopsis IDN1 and IDN2 are required for de novo DNA methylation in Arabidopsis thaliana.; PMID=19915591; DOI=10.1038/nsmb.1690 https://pubmed.ncbi.nlm.nih.gov/19915591/ LXL04_017812 LXL04_017812 reference_gene_literature At3g48670 Forms a complex with FDM1/IDNL1 and FDM2/IDNL2 that is required for RNA-directed DNA methylation (RdDM) and that functions at a downstream step of the RdDM pathway and downstream of small interfering RNA (siRNA) formation. Arabidopsis An SGS3-like protein functions in RNA-directed DNA methylation and transcriptional gene silencing in Arabidopsis.; PMID=20059743; DOI=10.1111/j.1365-313x.2010.04130.x https://pubmed.ncbi.nlm.nih.gov/20059743/ LXL04_017812 LXL04_017812 reference_gene_literature At3g48670 Forms a complex with FDM1/IDNL1 and FDM2/IDNL2 that is required for RNA-directed DNA methylation (RdDM) and that functions at a downstream step of the RdDM pathway and downstream of small interfering RNA (siRNA) formation. Arabidopsis IDN2 and its paralogs form a complex required for RNA-directed DNA methylation.; PMID=22570638; DOI=10.1371/journal.pgen.1002693 https://pubmed.ncbi.nlm.nih.gov/22570638/ LXL04_017812 LXL04_017812 reference_gene_literature At3g48670 Forms a complex with FDM1/IDNL1 and FDM2/IDNL2 that is required for RNA-directed DNA methylation (RdDM) and that functions at a downstream step of the RdDM pathway and downstream of small interfering RNA (siRNA) formation. Arabidopsis INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis.; PMID=22592791; DOI=10.1073/pnas.1206638109 https://pubmed.ncbi.nlm.nih.gov/22592791/ LXL04_017812 LXL04_017812 reference_gene_literature At3g48670 Forms a complex with FDM1/IDNL1 and FDM2/IDNL2 that is required for RNA-directed DNA methylation (RdDM) and that functions at a downstream step of the RdDM pathway and downstream of small interfering RNA (siRNA) formation. Arabidopsis IDN2 has a role downstream of siRNA formation in RNA-directed DNA methylation.; PMID=22810086; DOI=10.4161/epi.21237 https://pubmed.ncbi.nlm.nih.gov/22810086/ LXL04_017812 LXL04_017812 reference_gene_literature At3g48670 Forms a complex with FDM1/IDNL1 and FDM2/IDNL2 that is required for RNA-directed DNA methylation (RdDM) and that functions at a downstream step of the RdDM pathway and downstream of small interfering RNA (siRNA) formation. Arabidopsis A SWI/SNF chromatin-remodeling complex acts in noncoding RNA-mediated transcriptional silencing.; PMID=23246435; DOI=10.1016/j.molcel.2012.11.011 https://pubmed.ncbi.nlm.nih.gov/23246435/ LXL04_017812 LXL04_017812 reference_gene_literature At3g48670 Forms a complex with FDM1/IDNL1 and FDM2/IDNL2 that is required for RNA-directed DNA methylation (RdDM) and that functions at a downstream step of the RdDM pathway and downstream of small interfering RNA (siRNA) formation. Arabidopsis RNA-directed DNA methylation requires stepwise binding of silencing factors to long non-coding RNA.; PMID=24862207; DOI=10.1111/tpj.12563 https://pubmed.ncbi.nlm.nih.gov/24862207/ LXL04_017812 LXL04_017812 reference_gene_literature At3g48670 Forms a complex with FDM1/IDNL1 and FDM2/IDNL2 that is required for RNA-directed DNA methylation (RdDM) and that functions at a downstream step of the RdDM pathway and downstream of small interfering RNA (siRNA) formation. Arabidopsis Two Components of the RNA-Directed DNA Methylation Pathway Associate with MORC6 and Silence Loci Targeted by MORC6 in Arabidopsis.; PMID=27171427; DOI=10.1371/journal.pgen.1006026 https://pubmed.ncbi.nlm.nih.gov/27171427/ LXL04_017812 LXL04_017812 reference_gene_literature At1g13790 Acts in association with FDM3 and FDM5 for RNA-directed DNA methylation (RdDM). Arabidopsis A subgroup of SGS3-like proteins act redundantly in RNA-directed DNA methylation.; PMID=22302148; DOI=10.1093/nar/gks034 https://pubmed.ncbi.nlm.nih.gov/22302148/