query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_012505 LXL04_012505 function LXL04_012505 Similar to VPS9A: Vacuolar protein sorting-associated protein 9A (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0000919 cell plate assembly biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0006886 intracellular protein transport biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.824; coverage=107.471; evalue=1.67e-156; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0006897 endocytosis biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.78; coverage=62.644; evalue=3.57e-32; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0009793 embryo development ending in seed dormancy biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0016192 vesicle-mediated transport biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.824; coverage=107.471; evalue=1.67e-156; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0042546 cell wall biogenesis biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0045324 late endosome to vacuole transport biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0048528 post-embryonic root development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0051223 regulation of protein transport biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.78; coverage=62.644; evalue=3.57e-32; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0000325 plant-type vacuole cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.824; coverage=107.471; evalue=1.67e-156; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0005768 endosome cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.78; coverage=62.644; evalue=3.57e-32; UniProt GO evidence=IEA:UniProtKB-SubCell UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0005802 trans-Golgi network cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.824; coverage=107.471; evalue=1.67e-156; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0005829 cytosol cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0005886 plasma membrane cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.455; coverage=63.218; evalue=6.03e-32; UniProt GO evidence=IDA:HPA UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0016020 membrane cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.78; coverage=62.644; evalue=3.57e-32; UniProt GO evidence=IEA:UniProtKB-SubCell UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0030139 endocytic vesicle cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0005085 guanyl-nucleotide exchange factor activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0005096 GTPase activator activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0005525 GTP binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0031267 small GTPase binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0032794 GTPase activating protein binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.78; coverage=62.644; evalue=3.57e-32; UniProt GO evidence=ISS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0043130 ubiquitin binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=73.276; evalue=1.43e-40; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 GO GO:0045296 cadherin binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.455; coverage=63.218; evalue=6.03e-32; UniProt GO evidence=HDA:BHF-UCL UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 KEGG ath:AT3G19770 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.804; coverage=108.333; evalue=6.03e-164 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 KEGG dosa:Os03g0262900 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.824; coverage=107.471; evalue=1.67e-156 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 KEGG hsa:26130 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.455; coverage=63.218; evalue=6.03e-32 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 KEGG spo:2540886 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.333; coverage=73.276; evalue=1.43e-40 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 KEGG xla:100037133 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.78; coverage=62.644; evalue=3.57e-32 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_012505 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_012505 LXL04_012505 organism_homology Q9LT31 Vacuolar protein sorting-associated protein 9A OS=Arabidopsis thaliana OX=3702 GN=VPS9A PE=1 SV=1 Arabidopsis thaliana identity=61.804; coverage=100.0; evalue=6.03e-164; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_012505; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_012505 False LXL04_012505 LXL04_012505 organism_homology Q10NQ3 Vacuolar protein sorting-associated protein 9A OS=Oryza sativa subsp. japonica OX=39947 GN=VPS9A PE=1 SV=1 Oryza sativa subsp. japonica identity=58.824; coverage=99.713; evalue=1.67e-156; rank=2 OH-1004 Swiss-Prot homology; source_gene=LXL04_012505; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_012505 False LXL04_012505 LXL04_012505 reference_gene_literature At3g19770 Functions as a guanine nucleotide exchange factor (GEF) for Rab small GTPases. Arabidopsis VPS9a, the common activator for two distinct types of Rab5 GTPases, is essential for the development of Arabidopsis thaliana.; PMID=18055610; DOI=10.1105/tpc.107.053876 https://pubmed.ncbi.nlm.nih.gov/18055610/ LXL04_012505 LXL04_012505 reference_gene_literature At3g19770 Functions as a guanine nucleotide exchange factor (GEF) for Rab small GTPases. Arabidopsis GDP-bound and nucleotide-free intermediates of the guanine nucleotide exchange in the Rab5·Vps9 system.; PMID=20833725; DOI=10.1074/jbc.m110.152132 https://pubmed.ncbi.nlm.nih.gov/20833725/ LXL04_012505 LXL04_012505 reference_gene_literature Os03g0262900 Functions as a guanine nucleotide exchange factor (GEF) for Rab small GTPases. Rice OsVPS9A functions cooperatively with OsRAB5A to regulate post-Golgi dense vesicle-mediated storage protein trafficking to the protein storage vacuole in rice endosperm cells.; PMID=23723154; DOI=10.1093/mp/sst081 https://pubmed.ncbi.nlm.nih.gov/23723154/