query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_010397 LXL04_010397 function LXL04_010397 Similar to RUG3: RCC1 domain-containing protein RUG3%2C mitochondrial (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0006281 DNA repair biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0006397 mRNA processing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0006886 intracellular protein transport biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=NAS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0006974 DNA damage response biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0008380 RNA splicing biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0009738 abscisic acid-activated signaling pathway biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0009788 negative regulation of abscisic acid-activated signaling pathway biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0010228 vegetative to reproductive phase transition of meristem biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0016567 protein ubiquitination biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0032981 mitochondrial respiratory chain complex I assembly biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=IEA:Ensembl UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0050821 protein stabilization biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=EXP:DisProt UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0072702 response to methyl methanesulfonate biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=IEP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0005654 nucleoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=TAS:Reactome UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0005739 mitochondrion cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0005794 Golgi apparatus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0005814 centriole cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=IEA:UniProtKB-SubCell UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0005829 cytosol cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=IDA:HPA UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0009507 chloroplast cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0016020 membrane cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=HDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0005085 guanyl-nucleotide exchange factor activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=NAS:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0008270 zinc ion binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0031625 ubiquitin protein ligase binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=IPI:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0032183 SUMO binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 GO GO:0061630 ubiquitin protein ligase activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 KEGG ath:AT5G60870 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.85; coverage=98.391; evalue=0.0 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 KEGG hsa:8924 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.823; coverage=63.678; evalue=9.65e-46 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_010397 GCA_047496595.1_OSU_TarKok_2.0 strict_1to1 False LXL04_010397 LXL04_010397 organism_homology Q9FJG9 RCC1 domain-containing protein RUG3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RUG3 PE=1 SV=1 Arabidopsis thaliana identity=62.85; coverage=97.701; evalue=0.0; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_010397; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_010397 False LXL04_010397 LXL04_010397 organism_homology_status Oryza sativa 当前查询蛋白的来源表暂无该物种命中；不能据此判断不存在同源。 no_species_hit OH1004 OH1004 LXL04_010397 False LXL04_010397 LXL04_010397 reference_gene_literature At5g60870 Regulates DNA damage response (DDR) synergistically with ATM. Arabidopsis The RCC1 family protein RUG3 is required for splicing of nad2 and complex I biogenesis in mitochondria of Arabidopsis thaliana.; PMID=21623974; DOI=10.1111/j.1365-313x.2011.04658.x https://pubmed.ncbi.nlm.nih.gov/21623974/ LXL04_010397 LXL04_010397 reference_gene_literature At5g60870 Regulates DNA damage response (DDR) synergistically with ATM. Arabidopsis RUG3 and ATM synergistically regulate the alternative splicing of mitochondrial nad2 and the DNA damage response in Arabidopsis thaliana.; PMID=28262819; DOI=10.1038/srep43897 https://pubmed.ncbi.nlm.nih.gov/28262819/ LXL04_010397 LXL04_010397 reference_gene_literature At5g60870 Regulates DNA damage response (DDR) synergistically with ATM. Arabidopsis RUG3 is a negative regulator of plant responses to ABA in Arabidopsis thaliana.; PMID=28613105; DOI=10.1080/15592324.2017.1333217 https://pubmed.ncbi.nlm.nih.gov/28613105/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis A UV-B-specific signaling component orchestrates plant UV protection.; PMID=16330762; DOI=10.1073/pnas.0507187102 https://pubmed.ncbi.nlm.nih.gov/16330762/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis UV-B promotes rapid nuclear translocation of the Arabidopsis UV-B specific signaling component UVR8 and activates its function in the nucleus.; PMID=17720867; DOI=10.1105/tpc.107.053330 https://pubmed.ncbi.nlm.nih.gov/17720867/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis UV-B signaling pathways with different fluence-rate response profiles are distinguished in mature Arabidopsis leaf tissue by requirement for UVR8, HY5, and HYH.; PMID=18055587; DOI=10.1104/pp.107.108456 https://pubmed.ncbi.nlm.nih.gov/18055587/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis Interaction of COP1 and UVR8 regulates UV-B-induced photomorphogenesis and stress acclimation in Arabidopsis.; PMID=19165148; DOI=10.1038/emboj.2009.4 https://pubmed.ncbi.nlm.nih.gov/19165148/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis UVR8 in Arabidopsis thaliana regulates multiple aspects of cellular differentiation during leaf development in response to ultraviolet B radiation.; PMID=19402876; DOI=10.1111/j.1469-8137.2009.02855.x https://pubmed.ncbi.nlm.nih.gov/19402876/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis Negative feedback regulation of UV-B-induced photomorphogenesis and stress acclimation in Arabidopsis.; PMID=21041653; DOI=10.1073/pnas.0914532107 https://pubmed.ncbi.nlm.nih.gov/21041653/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis Functional interaction of the circadian clock and UV RESISTANCE LOCUS 8-controlled UV-B signaling pathways in Arabidopsis thaliana.; PMID=21395889; DOI=10.1111/j.1365-313x.2011.04573.x https://pubmed.ncbi.nlm.nih.gov/21395889/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis Perception of UV-B by the Arabidopsis UVR8 protein.; PMID=21454788; DOI=10.1126/science.1200660 https://pubmed.ncbi.nlm.nih.gov/21454788/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis UVR8 mediates UV-B-induced Arabidopsis defense responses against Botrytis cinerea by controlling sinapate accumulation.; PMID=22447155; DOI=10.1093/mp/sss025 https://pubmed.ncbi.nlm.nih.gov/22447155/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis C-terminal region of the UV-B photoreceptor UVR8 initiates signaling through interaction with the COP1 protein.; PMID=22988111; DOI=10.1073/pnas.1210898109 https://pubmed.ncbi.nlm.nih.gov/22988111/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis In vivo function of tryptophans in the Arabidopsis UV-B photoreceptor UVR8.; PMID=23012433; DOI=10.1105/tpc.112.101451 https://pubmed.ncbi.nlm.nih.gov/23012433/ LXL04_010397 LXL04_010397 reference_gene_literature At5g63860 UV-B specific signaling component that acts as a UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Arabidopsis The UV-B photoreceptor UVR8 promotes photosynthetic efficiency in Arabidopsis thaliana exposed to elevated levels of UV-B.; PMID=23161229; DOI=10.1007/s11120-012-9785-y https://pubmed.ncbi.nlm.nih.gov/23161229/