query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_008292 LXL04_008292 function LXL04_008292 Similar to RPT3: Root phototropism protein 3 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0009638 phototropism biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.254; coverage=108.0; evalue=3.1e-76; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0009785 blue light signaling pathway biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.254; coverage=108.0; evalue=3.1e-76; UniProt GO evidence=IPI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0009908 flower development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0009911 positive regulation of flower development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0009958 positive gravitropism biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IGI:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0010087 phloem or xylem histogenesis biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.287; coverage=73.714; evalue=2.43e-30; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0010229 inflorescence development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0010305 leaf vascular tissue pattern formation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.287; coverage=73.714; evalue=2.43e-30; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0010540 basipetal auxin transport biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0010588 cotyledon vascular tissue pattern formation biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.287; coverage=73.714; evalue=2.43e-30; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0016567 protein ubiquitination biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.254; coverage=108.0; evalue=3.1e-76; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0045176 apical protein localization biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0048367 shoot system development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.287; coverage=73.714; evalue=2.43e-30; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0048825 cotyledon development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0071365 cellular response to auxin stimulus biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IEP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0080022 primary root development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.287; coverage=73.714; evalue=2.43e-30; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:1901703 protein localization involved in auxin polar transport biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:2000012 regulation of auxin polar transport biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.254; coverage=108.0; evalue=3.1e-76; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0005770 late endosome cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0005829 cytosol cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0005886 plasma membrane cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.254; coverage=108.0; evalue=3.1e-76; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0016324 apical plasma membrane cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 GO GO:0071944 cell periphery cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 KEGG ath:AT4G31820 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.269; coverage=76.571; evalue=2.71e-31 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 KEGG ath:AT5G10250 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.287; coverage=73.714; evalue=2.43e-30 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 KEGG ath:AT5G64330 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.254; coverage=108.0; evalue=3.1e-76 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 KEGG ath:AT5G67440 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.312; coverage=73.143; evalue=3.63e-29 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 KEGG dosa:Os02g0568200 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.702; coverage=92.0; evalue=7.89e-64 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_008292 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_008292 LXL04_008292 organism_homology Q9FMF5 Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2 Arabidopsis thaliana identity=68.254; coverage=87.429; evalue=3.1e-76; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_008292; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_008292 False LXL04_008292 LXL04_008292 organism_homology Q5KS50 Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CPT1 PE=2 SV=1 Oryza sativa subsp. japonica identity=67.702; coverage=76.571; evalue=7.89e-64; rank=2 OH-1004 Swiss-Prot homology; source_gene=LXL04_008292; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_008292 False LXL04_008292 LXL04_008292 reference_gene_literature At5g64330 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis Arabidopsis NPH3: A NPH1 photoreceptor-interacting protein essential for phototropism.; PMID=10542152; DOI=10.1126/science.286.5441.961 https://pubmed.ncbi.nlm.nih.gov/10542152/ LXL04_008292 LXL04_008292 reference_gene_literature At5g64330 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis RPT2. A signal transducer of the phototropic response in Arabidopsis.; PMID=10662859; DOI=10.1105/tpc.12.2.225 https://pubmed.ncbi.nlm.nih.gov/10662859/ LXL04_008292 LXL04_008292 reference_gene_literature At5g64330 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis RPT2 is a signal transducer involved in phototropic response and stomatal opening by association with phototropin 1 in Arabidopsis thaliana.; PMID=15031408; DOI=10.1105/tpc.019901 https://pubmed.ncbi.nlm.nih.gov/15031408/ LXL04_008292 LXL04_008292 reference_gene_literature At5g64330 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis PHYTOCHROME KINASE SUBSTRATE 1 is a phototropin 1 binding protein required for phototropism.; PMID=16777956; DOI=10.1073/pnas.0603799103 https://pubmed.ncbi.nlm.nih.gov/16777956/ LXL04_008292 LXL04_008292 reference_gene_literature At5g64330 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis The Arabidopsis PHYTOCHROME KINASE SUBSTRATE2 protein is a phototropin signaling element that regulates leaf flattening and leaf positioning.; PMID=20071603; DOI=10.1104/pp.109.150441 https://pubmed.ncbi.nlm.nih.gov/20071603/ LXL04_008292 LXL04_008292 reference_gene_literature At4g31820 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis NPY1, a BTB-NPH3-like protein, plays a critical role in auxin-regulated organogenesis in Arabidopsis.; PMID=18000043; DOI=10.1073/pnas.0708506104 https://pubmed.ncbi.nlm.nih.gov/18000043/ LXL04_008292 LXL04_008292 reference_gene_literature At4g31820 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis NPY genes and AGC kinases define two key steps in auxin-mediated organogenesis in Arabidopsis.; PMID=19075219; DOI=10.1073/pnas.0809761106 https://pubmed.ncbi.nlm.nih.gov/19075219/ LXL04_008292 LXL04_008292 reference_gene_literature At4g31820 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis NPY genes play an essential role in root gravitropic responses in Arabidopsis.; PMID=20833732; DOI=10.1093/mp/ssq052 https://pubmed.ncbi.nlm.nih.gov/20833732/ LXL04_008292 LXL04_008292 reference_gene_literature At4g31820 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis Polar-localized NPH3-like proteins regulate polarity and endocytosis of PIN-FORMED auxin efflux carriers.; PMID=21490067; DOI=10.1242/dev.057745 https://pubmed.ncbi.nlm.nih.gov/21490067/ LXL04_008292 LXL04_008292 reference_gene_literature At4g31820 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis MAB4-induced auxin sink generates local auxin gradients in Arabidopsis organ formation.; PMID=24395791; DOI=10.1073/pnas.1316109111 https://pubmed.ncbi.nlm.nih.gov/24395791/ LXL04_008292 LXL04_008292 reference_gene_literature At4g31820 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis AGC kinases and MAB4/MEL proteins maintain PIN polarity by limiting lateral diffusion in plant cells.; PMID=33705718; DOI=10.1016/j.cub.2021.02.028 https://pubmed.ncbi.nlm.nih.gov/33705718/ LXL04_008292 LXL04_008292 reference_gene_function At5g10250 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis No verified direct reference in this release LXL04_008292 LXL04_008292 reference_gene_literature At5g67440 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis NPY genes and AGC kinases define two key steps in auxin-mediated organogenesis in Arabidopsis.; PMID=19075219; DOI=10.1073/pnas.0809761106 https://pubmed.ncbi.nlm.nih.gov/19075219/ LXL04_008292 LXL04_008292 reference_gene_literature At5g67440 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Arabidopsis NPY genes play an essential role in root gravitropic responses in Arabidopsis.; PMID=20833732; DOI=10.1093/mp/ssq052 https://pubmed.ncbi.nlm.nih.gov/20833732/ LXL04_008292 LXL04_008292 reference_gene_literature Os02g0568200 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Rice The Rice COLEOPTILE PHOTOTROPISM1 gene encoding an ortholog of Arabidopsis NPH3 is required for phototropism of coleoptiles and lateral translocation of auxin.; PMID=15598797; DOI=10.1105/tpc.104.028357 https://pubmed.ncbi.nlm.nih.gov/15598797/