query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_007827 LXL04_007827 function LXL04_007827 Similar to MADS26: MADS-box transcription factor 26 (Oryza sativa subsp. japonica OX%3D39947) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.289; coverage=42.784; evalue=8.59e-38; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0006357 regulation of transcription by RNA polymerase II biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.289; coverage=42.784; evalue=8.59e-38; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0007584 response to nutrient biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.429; coverage=36.082; evalue=1.01e-27; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0009908 flower development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.324; coverage=38.144; evalue=2.35e-36; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0010167 response to nitrate biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.429; coverage=36.082; evalue=1.01e-27; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0010228 vegetative to reproductive phase transition of meristem biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.324; coverage=38.144; evalue=2.35e-36; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0045944 positive regulation of transcription by RNA polymerase II biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.289; coverage=42.784; evalue=8.59e-38; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0048364 root development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.324; coverage=38.144; evalue=2.35e-36; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0048527 lateral root development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.429; coverage=36.082; evalue=1.01e-27; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0071249 cellular response to nitrate biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.429; coverage=36.082; evalue=1.01e-27; UniProt GO evidence=IEP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.289; coverage=42.784; evalue=8.59e-38; UniProt GO evidence=IEA:UniProtKB-SubCell UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0000976 transcription cis-regulatory region binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.429; coverage=36.082; evalue=1.01e-27; UniProt GO evidence=IPI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.289; coverage=42.784; evalue=8.59e-38; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.289; coverage=42.784; evalue=8.59e-38; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.289; coverage=42.784; evalue=8.59e-38; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0003700 DNA-binding transcription factor activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.289; coverage=42.784; evalue=8.59e-38; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 GO GO:0046983 protein dimerization activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.289; coverage=42.784; evalue=8.59e-38; UniProt GO evidence=IEA:InterPro UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 KEGG ath:AT1G71692 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.324; coverage=38.144; evalue=2.35e-36 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 KEGG ath:AT2G14210 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.429; coverage=36.082; evalue=1.01e-27 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 KEGG dosa:Os08g0112700 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.289; coverage=42.784; evalue=8.59e-38 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 KEGG dosa:Os12g0206800 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=82.857; coverage=36.082; evalue=6.03e-36 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_007827 GCA_047496595.1_OSU_TarKok_2.0 annotation_conflict False LXL04_007827 LXL04_007827 organism_homology Q38841 Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=1 SV=2 Arabidopsis thaliana identity=74.324; coverage=38.144; evalue=2.35e-36; rank=3 OH-1004 Swiss-Prot homology; source_gene=LXL04_007827; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_007827 False LXL04_007827 LXL04_007827 organism_homology Q0J8G8 MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS26 PE=2 SV=1 Oryza sativa subsp. japonica identity=72.289; coverage=42.784; evalue=8.59e-38; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_007827; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_007827 False LXL04_007827 LXL04_007827 reference_gene_literature At1g71692 Probable transcription activator that regulates root development by controlling cell proliferation in root meristem. Arabidopsis An AGAMOUS-related MADS-box gene, XAL1 (AGL12), regulates root meristem cell proliferation and flowering transition in Arabidopsis.; PMID=18203871; DOI=10.1104/pp.107.108647 https://pubmed.ncbi.nlm.nih.gov/18203871/ LXL04_007827 LXL04_007827 reference_gene_literature At2g14210 Probable transcription factor. Arabidopsis Nitrate and glutamate sensing by plant roots.; PMID=15667327; DOI=10.1042/bst0330283 https://pubmed.ncbi.nlm.nih.gov/15667327/ LXL04_007827 LXL04_007827 reference_gene_literature At2g14210 Probable transcription factor. Arabidopsis The Arabidopsis NRT1.1 transporter participates in the signaling pathway triggering root colonization of nitrate-rich patches.; PMID=17148611; DOI=10.1073/pnas.0605275103 https://pubmed.ncbi.nlm.nih.gov/17148611/ LXL04_007827 LXL04_007827 reference_gene_literature At2g14210 Probable transcription factor. Arabidopsis An Arabidopsis MADS box gene that controls nutrient-induced changes in root architecture.; PMID=9430595; DOI=10.1126/science.279.5349.407 https://pubmed.ncbi.nlm.nih.gov/9430595/ LXL04_007827 LXL04_007827 reference_gene_function Os08g0112700 Probable transcription factor. Rice No verified direct reference in this release LXL04_007827 LXL04_007827 reference_gene_function A2YQK9 Probable transcription factor. Rice No verified direct reference in this release LXL04_007827 LXL04_007827 reference_gene_function Os12g0206800 Probable transcription factor. Rice No verified direct reference in this release