query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_003892 LXL04_003892 function LXL04_003892 Similar to APRR2: Two-component response regulator-like APRR2 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0000160 phosphorelay signal transduction system biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.154; coverage=109.823; evalue=4.73e-113; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.154; coverage=109.823; evalue=4.73e-113; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0007165 signal transduction biological_process Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.986; coverage=69.745; evalue=1.86e-25; UniProt GO evidence=IEP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0007623 circadian rhythm biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.154; coverage=109.823; evalue=4.73e-113; UniProt GO evidence=TAS:TIGR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0009658 chloroplast organization biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.844; coverage=50.295; evalue=2.27e-27; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0009723 response to ethylene biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0009735 response to cytokinin biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0009736 cytokinin-activated signaling pathway biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=TAS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0009873 ethylene-activated signaling pathway biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0009910 negative regulation of flower development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.844; coverage=50.295; evalue=2.27e-27; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0010082 regulation of root meristem growth biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0010119 regulation of stomatal movement biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0010150 leaf senescence biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0010380 regulation of chlorophyll biosynthetic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.844; coverage=50.295; evalue=2.27e-27; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0045893 positive regulation of DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.154; coverage=109.823; evalue=4.73e-113; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0048364 root development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0071368 cellular response to cytokinin stimulus biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0080113 regulation of seed growth biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=IMP:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:1900056 negative regulation of leaf senescence biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.844; coverage=50.295; evalue=2.27e-27; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.154; coverage=109.823; evalue=4.73e-113; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0005737 cytoplasm cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.154; coverage=109.823; evalue=4.73e-113; UniProt GO evidence=ISM:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0005829 cytosol cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=HDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0000156 phosphorelay response regulator activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=ISS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0000976 transcription cis-regulatory region binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.154; coverage=109.823; evalue=4.73e-113; UniProt GO evidence=IPI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0003677 DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 GO GO:0003700 DNA-binding transcription factor activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.154; coverage=109.823; evalue=4.73e-113; UniProt GO evidence=ISS:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 KEGG ath:AT2G20570 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.986; coverage=69.745; evalue=1.86e-25 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 KEGG ath:AT4G16110 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.729; coverage=21.022; evalue=6.85e-18 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 KEGG ath:AT4G18020 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.154; coverage=109.823; evalue=4.73e-113 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 KEGG ath:AT5G44190 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.844; coverage=50.295; evalue=2.27e-27 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 KEGG dosa:Os01g0239000 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.246; coverage=22.397; evalue=2.11e-24 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003892 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003892 LXL04_003892 organism_homology Q6LA43 Two-component response regulator-like APRR2 OS=Arabidopsis thaliana OX=3702 GN=APRR2 PE=2 SV=2 Arabidopsis thaliana identity=46.154; coverage=99.804; evalue=4.73e-113; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_003892; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_003892 False LXL04_003892 LXL04_003892 organism_homology Q5NAN5 Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica OX=39947 GN=GLK2 PE=2 SV=1 Oryza sativa subsp. japonica identity=48.246; coverage=22.2; evalue=2.11e-24; rank=4 OH-1004 Swiss-Prot homology; source_gene=LXL04_003892; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_003892 False LXL04_003892 LXL04_003892 reference_gene_function At4g18020 Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Arabidopsis No verified direct reference in this release LXL04_003892 LXL04_003892 reference_gene_literature At5g44190 Transcriptional activator that functions with GLK1 to promote chloroplast development. Arabidopsis Arabidopsis GARP transcriptional activators interact with the Pro-rich activation domain shared by G-box-binding bZIP factors.; PMID=11828027; DOI=10.1093/pcp/pcf011 https://pubmed.ncbi.nlm.nih.gov/11828027/ LXL04_003892 LXL04_003892 reference_gene_literature At5g44190 Transcriptional activator that functions with GLK1 to promote chloroplast development. Arabidopsis GLK gene pairs regulate chloroplast development in diverse plant species.; PMID=12220263; DOI=10.1046/j.1365-313x.2002.01390.x https://pubmed.ncbi.nlm.nih.gov/12220263/ LXL04_003892 LXL04_003892 reference_gene_literature At5g44190 Transcriptional activator that functions with GLK1 to promote chloroplast development. Arabidopsis GLK transcription factors regulate chloroplast development in a cell-autonomous manner.; PMID=18643989; DOI=10.1111/j.1365-313x.2008.03616.x https://pubmed.ncbi.nlm.nih.gov/18643989/ LXL04_003892 LXL04_003892 reference_gene_literature At5g44190 Transcriptional activator that functions with GLK1 to promote chloroplast development. Arabidopsis GLK transcription factors coordinate expression of the photosynthetic apparatus in Arabidopsis.; PMID=19376934; DOI=10.1105/tpc.108.065250 https://pubmed.ncbi.nlm.nih.gov/19376934/ LXL04_003892 LXL04_003892 reference_gene_literature At5g44190 Transcriptional activator that functions with GLK1 to promote chloroplast development. Arabidopsis Specialization of the Golden2-like regulatory pathway during land plant evolution.; PMID=19383092; DOI=10.1111/j.1469-8137.2009.02829.x https://pubmed.ncbi.nlm.nih.gov/19383092/ LXL04_003892 LXL04_003892 reference_gene_literature At5g44190 Transcriptional activator that functions with GLK1 to promote chloroplast development. Arabidopsis ORE1 balances leaf senescence against maintenance by antagonizing G2-like-mediated transcription.; PMID=23459204; DOI=10.1038/embor.2013.24 https://pubmed.ncbi.nlm.nih.gov/23459204/ LXL04_003892 LXL04_003892 reference_gene_literature At2g20570 Transcriptional activator that functions with GLK2 to promote chloroplast development. Arabidopsis Arabidopsis GARP transcriptional activators interact with the Pro-rich activation domain shared by G-box-binding bZIP factors.; PMID=11828027; DOI=10.1093/pcp/pcf011 https://pubmed.ncbi.nlm.nih.gov/11828027/ LXL04_003892 LXL04_003892 reference_gene_literature At2g20570 Transcriptional activator that functions with GLK2 to promote chloroplast development. Arabidopsis GLK gene pairs regulate chloroplast development in diverse plant species.; PMID=12220263; DOI=10.1046/j.1365-313x.2002.01390.x https://pubmed.ncbi.nlm.nih.gov/12220263/ LXL04_003892 LXL04_003892 reference_gene_literature At2g20570 Transcriptional activator that functions with GLK2 to promote chloroplast development. Arabidopsis The GLK1 'regulon' encodes disease defense related proteins and confers resistance to Fusarium graminearum in Arabidopsis.; PMID=17533111; DOI=10.1016/j.bbrc.2007.05.084 https://pubmed.ncbi.nlm.nih.gov/17533111/ LXL04_003892 LXL04_003892 reference_gene_literature At2g20570 Transcriptional activator that functions with GLK2 to promote chloroplast development. Arabidopsis GLK transcription factors regulate chloroplast development in a cell-autonomous manner.; PMID=18643989; DOI=10.1111/j.1365-313x.2008.03616.x https://pubmed.ncbi.nlm.nih.gov/18643989/ LXL04_003892 LXL04_003892 reference_gene_literature At2g20570 Transcriptional activator that functions with GLK2 to promote chloroplast development. Arabidopsis GLK transcription factors coordinate expression of the photosynthetic apparatus in Arabidopsis.; PMID=19376934; DOI=10.1105/tpc.108.065250 https://pubmed.ncbi.nlm.nih.gov/19376934/ LXL04_003892 LXL04_003892 reference_gene_literature At2g20570 Transcriptional activator that functions with GLK2 to promote chloroplast development. Arabidopsis Specialization of the Golden2-like regulatory pathway during land plant evolution.; PMID=19383092; DOI=10.1111/j.1469-8137.2009.02829.x https://pubmed.ncbi.nlm.nih.gov/19383092/ LXL04_003892 LXL04_003892 reference_gene_literature At2g20570 Transcriptional activator that functions with GLK2 to promote chloroplast development. Arabidopsis Coordination of plastid protein import and nuclear gene expression by plastid-to-nucleus retrograde signaling.; PMID=19726569; DOI=10.1104/pp.109.145987 https://pubmed.ncbi.nlm.nih.gov/19726569/ LXL04_003892 LXL04_003892 reference_gene_literature At2g20570 Transcriptional activator that functions with GLK2 to promote chloroplast development. Arabidopsis ORE1 balances leaf senescence against maintenance by antagonizing G2-like-mediated transcription.; PMID=23459204; DOI=10.1038/embor.2013.24 https://pubmed.ncbi.nlm.nih.gov/23459204/ LXL04_003892 LXL04_003892 reference_gene_literature At4g16110 Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Arabidopsis The response regulator ARR2: a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis.; PMID=11370868; DOI=10.1007/s004380000400 https://pubmed.ncbi.nlm.nih.gov/11370868/ LXL04_003892 LXL04_003892 reference_gene_literature At4g16110 Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Arabidopsis Two-component circuitry in Arabidopsis cytokinin signal transduction.; PMID=11574878; DOI=10.1038/35096500 https://pubmed.ncbi.nlm.nih.gov/11574878/ LXL04_003892 LXL04_003892 reference_gene_literature At4g16110 Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Arabidopsis The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis.; PMID=15282545; DOI=10.1038/sj.emboj.7600337 https://pubmed.ncbi.nlm.nih.gov/15282545/ LXL04_003892 LXL04_003892 reference_gene_literature At4g16110 Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Arabidopsis Cytokinin-mediated control of leaf longevity by AHK3 through phosphorylation of ARR2 in Arabidopsis.; PMID=16407152; DOI=10.1073/pnas.0505150103 https://pubmed.ncbi.nlm.nih.gov/16407152/ LXL04_003892 LXL04_003892 reference_gene_function Os01g0239000 Probable transcriptional activator that promotes chloroplast development. Rice No verified direct reference in this release