query gene_id record_type id name namespace_or_position evidence source query_reference annotation_reference annotation_gene_id annotation_assembly mapping_category mapped_annotation LXL04_003103 LXL04_003103 function LXL04_003103 Similar to SRS5: Protein SHI RELATED SEQUENCE 5 (Arabidopsis thaliana OX%3D3702) GFF-derived GCA_047496595.1_OSU_TarKok_2.0 OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0006351 DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=88.0; coverage=24.876; evalue=2.91e-27; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0006355 regulation of DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=82.353; coverage=25.373; evalue=5.72e-26; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0009299 mRNA transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=73.333; coverage=29.851; evalue=4.41e-26; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0009555 pollen development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0009640 photomorphogenesis biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0009734 auxin-activated signaling pathway biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0009851 auxin biosynthetic process biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0045893 positive regulation of DNA-templated transcription biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0048450 floral organ structural organization biological_process Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=82.353; coverage=25.373; evalue=5.72e-26; UniProt GO evidence=IMP:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0048653 anther development biological_process Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IGI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0005634 nucleus cellular_component Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0003677 DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IBA:GO_Central UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0003700 DNA-binding transcription factor activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0042803 protein homodimerization activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=82.353; coverage=25.373; evalue=5.72e-26; UniProt GO evidence=IDA:UniProtKB UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0043565 sequence-specific DNA binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IDA:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0046872 metal ion binding molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29; UniProt GO evidence=IEA:UniProtKB-KW UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 GO GO:0046982 protein heterodimerization activity molecular_function Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.333; coverage=29.851; evalue=8.98e-27; UniProt GO evidence=IPI:TAIR UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 KEGG ath:AT1G19790 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=73.333; coverage=29.851; evalue=4.41e-26 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 KEGG ath:AT1G75520 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.929; coverage=27.861; evalue=5.32e-29 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 KEGG ath:AT3G51060 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=73.333; coverage=29.851; evalue=8.98e-27 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 KEGG dosa:Os09g0531600 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=82.353; coverage=25.373; evalue=5.72e-26 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 KEGG osa:4347669 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=82.353; coverage=25.373; evalue=5.72e-26 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 KEGG sly:101251254 KEGG gene cross-reference from reviewed UniProt hit; pathway name pending Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=88.0; coverage=24.876; evalue=2.91e-27 UniProtKB/Swiss-Prot DAT 2026 current_release OH1004 OH1004 LXL04_003103 GCA_047496595.1_OSU_TarKok_2.0 False LXL04_003103 LXL04_003103 organism_homology Q9LQZ5 Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1 Arabidopsis thaliana identity=83.929; coverage=27.861; evalue=5.32e-29; rank=1 OH-1004 Swiss-Prot homology; source_gene=LXL04_003103; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_003103 False LXL04_003103 LXL04_003103 organism_homology Q652K4 Protein SHORT INTERNODES 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHI1 PE=1 SV=1 Oryza sativa subsp. japonica identity=82.353; coverage=25.373; evalue=5.72e-26; rank=5 OH-1004 Swiss-Prot homology; source_gene=LXL04_003103; source_db=UniProt Swiss-Prot current_release 2026-06-10 OH1004 OH1004 LXL04_003103 False LXL04_003103 LXL04_003103 reference_gene_literature At1g75520 Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Arabidopsis Functionally redundant SHI family genes regulate Arabidopsis gynoecium development in a dose-dependent manner.; PMID=16740146; DOI=10.1111/j.1365-313x.2006.02774.x https://pubmed.ncbi.nlm.nih.gov/16740146/ LXL04_003103 LXL04_003103 reference_gene_literature At3g51060 Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Arabidopsis STY1 and STY2 promote the formation of apical tissues during Arabidopsis gynoecium development.; PMID=12361963; DOI=10.1242/dev.129.20.4707 https://pubmed.ncbi.nlm.nih.gov/12361963/ LXL04_003103 LXL04_003103 reference_gene_literature At3g51060 Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Arabidopsis STY1 regulates auxin homeostasis and affects apical-basal patterning of the Arabidopsis gynoecium.; PMID=16740145; DOI=10.1111/j.1365-313x.2006.02775.x https://pubmed.ncbi.nlm.nih.gov/16740145/ LXL04_003103 LXL04_003103 reference_gene_literature At3g51060 Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Arabidopsis Functionally redundant SHI family genes regulate Arabidopsis gynoecium development in a dose-dependent manner.; PMID=16740146; DOI=10.1111/j.1365-313x.2006.02774.x https://pubmed.ncbi.nlm.nih.gov/16740146/ LXL04_003103 LXL04_003103 reference_gene_literature At3g51060 Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Arabidopsis Auxin can act independently of CRC, LUG, SEU, SPT and STY1 in style development but not apical-basal patterning of the Arabidopsis gynoecium.; PMID=18811619; DOI=10.1111/j.1469-8137.2008.02625.x https://pubmed.ncbi.nlm.nih.gov/18811619/ LXL04_003103 LXL04_003103 reference_gene_literature At3g51060 Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Arabidopsis The Arabidopsis thaliana STYLISH1 protein acts as a transcriptional activator regulating auxin biosynthesis.; PMID=20154152; DOI=10.1105/tpc.108.064816 https://pubmed.ncbi.nlm.nih.gov/20154152/ LXL04_003103 LXL04_003103 reference_gene_literature At3g51060 Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Arabidopsis The Arabidopsis thaliana transcriptional activator STYLISH1 regulates genes affecting stamen development, cell expansion and timing of flowering.; PMID=22318676; DOI=10.1007/s11103-012-9888-z https://pubmed.ncbi.nlm.nih.gov/22318676/ LXL04_003103 LXL04_003103 reference_gene_literature At1g19790 Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Arabidopsis Functionally redundant SHI family genes regulate Arabidopsis gynoecium development in a dose-dependent manner.; PMID=16740146; DOI=10.1111/j.1365-313x.2006.02774.x https://pubmed.ncbi.nlm.nih.gov/16740146/ LXL04_003103 LXL04_003103 reference_gene_literature At1g19790 Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Arabidopsis Activation tagging of an Arabidopsis SHI-RELATED SEQUENCE gene produces abnormal anther dehiscence and floral development.; PMID=20706774; DOI=10.1007/s11103-010-9677-5 https://pubmed.ncbi.nlm.nih.gov/20706774/ LXL04_003103 LXL04_003103 reference_gene_literature Os09g0531600 Regulates tillering and panicle branching by modulating SPL14/IPA1 transcriptional activity on the downstream TB1 and DEP1 target genes. Rice OsSHI1 Regulates Plant Architecture Through Modulating the Transcriptional Activity of IPA1 in Rice.; PMID=30914468; DOI=10.1105/tpc.19.00023 https://pubmed.ncbi.nlm.nih.gov/30914468/